Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RNU6-728P-201ENST00000365375 104 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 RNY3P5-201ENST00000384127 102 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 SNRPGP8-201ENST00000454064 226 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 AC233266.1-201ENST00000454518 96 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 RNU6-1333P-201ENST00000516162 93 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 MIR4524B-201ENST00000581569 115 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 AC242852.1-201ENST00000612151 96 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 U1.36-201ENST00000620684 176 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 AC244015.1-201ENST00000622301 99 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 AP001340.1-201ENST00000624405 217 ntBASIC1.97□□□□□ -2.09
RFX6Q8HWS3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
RFX6Q8HWS3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.09
RFX6Q8HWS3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RFX6Q8HWS3 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
RFX6Q8HWS3 RNA5SP501-201ENST00000410990 112 ntBASIC1.96□□□□□ -2.1
RFX6Q8HWS3 RNVU1-2-201ENST00000516326 135 ntBASIC1.96□□□□□ -2.1
RFX6Q8HWS3 AL358944.1-201ENST00000528537 144 ntBASIC1.96□□□□□ -2.1
RFX6Q8HWS3 AC084364.2-201ENST00000546924 395 ntBASIC1.96□□□□□ -2.1
RFX6Q8HWS3 AC091544.4-201ENST00000555268 342 ntBASIC1.96□□□□□ -2.1
RFX6Q8HWS3 AL929325.1-201ENST00000603096 117 ntBASIC1.96□□□□□ -2.1
RFX6Q8HWS3 AL021707.8-201ENST00000609428 183 ntBASIC1.96□□□□□ -2.1
RFX6Q8HWS3 MIR7843-201ENST00000622274 79 ntBASIC1.96□□□□□ -2.1
RFX6Q8HWS3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RFX6Q8HWS3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RFX6Q8HWS3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RFX6Q8HWS3 U8.2-201ENST00000363156 134 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 MIR539-201ENST00000365690 78 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 RNU6-80P-201ENST00000384195 107 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 Y_RNA.563-201ENST00000384707 108 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 RNU6-460P-201ENST00000391158 108 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 RN7SKP101-201ENST00000411376 320 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RFX6Q8HWS3 RNU6-1211P-201ENST00000459179 105 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX6Q8HWS3 AP002004.2-201ENST00000531656 154 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX6Q8HWS3 MIR2681-201ENST00000581814 105 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
RFX6Q8HWS3 RNU6-199P-201ENST00000362954 107 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 SNORA70B-201ENST00000384210 135 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 RNU6-588P-201ENST00000410281 105 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 RNU6-659P-201ENST00000516454 104 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 RNU2-56P-201ENST00000516826 190 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 AC022217.4-201ENST00000604389 163 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 TUG1_4.1-201ENST00000619464 181 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 MIR6844-201ENST00000637122 62 ntBASIC1.94□□□□□ -2.1
RFX6Q8HWS3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
RFX6Q8HWS3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFX6Q8HWS3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
RFX6Q8HWS3 SNORD45.3-201ENST00000363836 72 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 RNU4-41P-201ENST00000364426 143 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 RNU6-597P-201ENST00000365620 102 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 RNU6-484P-201ENST00000384016 107 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 RNU6-44P-201ENST00000384045 107 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 RNA5SP496-201ENST00000391240 109 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 RN7SKP192-201ENST00000411291 327 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 AC245047.3-201ENST00000429428 127 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 RNU4-57P-201ENST00000515980 135 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 Y_RNA.686-201ENST00000516548 134 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 MIR4648-201ENST00000580107 72 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.93□□□□□ -2.1
RFX6Q8HWS3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFX6Q8HWS3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFX6Q8HWS3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
RFX6Q8HWS3 SNORA1B-201ENST00000362535 133 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 RNU6-978P-201ENST00000364371 103 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 MIR520A-201ENST00000384862 85 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RFX6Q8HWS3 RNA5SP109-201ENST00000391010 116 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 Y_RNA.622-201ENST00000411091 108 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 AL035461.1-201ENST00000421490 332 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX6Q8HWS3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.92□□□□□ -2.1
RFX6Q8HWS3 RPS27P1-201ENST00000450552 247 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX6Q8HWS3 SUB1P4-201ENST00000566062 339 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 AL359881.1-201ENST00000602916 267 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 AC120024.3-201ENST00000603167 156 ntBASIC1.92□□□□□ -2.1
RFX6Q8HWS3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.92□□□□□ -2.1
RFX6Q8HWS3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RFX6Q8HWS3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RFX6Q8HWS3 RNU6-834P-201ENST00000362367 110 ntBASIC1.91□□□□□ -2.1
RFX6Q8HWS3 SNORA63D-201ENST00000364359 132 ntBASIC1.91□□□□□ -2.1
RFX6Q8HWS3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.91□□□□□ -2.1
RFX6Q8HWS3 SNORD37.2-201ENST00000391075 66 ntBASIC1.91□□□□□ -2.1
RFX6Q8HWS3 SNORA75.5-201ENST00000391291 81 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms