Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.7□□□□□ -1.98
RTP1P59025 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RTP1P59025 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RTP1P59025 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.69□□□□□ -1.98
RTP1P59025 Y_RNA.99-201ENST00000363138 105 ntBASIC2.69□□□□□ -1.98
RTP1P59025 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RTP1P59025 SNORD77.3-201ENST00000391113 65 ntBASIC2.69□□□□□ -1.98
RTP1P59025 AC092427.1-202ENST00000430569 476 ntBASIC2.69□□□□□ -1.98
RTP1P59025 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.69□□□□□ -1.98
RTP1P59025 RNU1-131P-201ENST00000458943 161 ntBASIC2.69□□□□□ -1.98
RTP1P59025 Y_RNA.649-201ENST00000459077 103 ntBASIC2.69□□□□□ -1.98
RTP1P59025 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.69□□□□□ -1.98
RTP1P59025 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.69□□□□□ -1.98
RTP1P59025 MIR6873-201ENST00000622788 63 ntBASIC2.69□□□□□ -1.98
RTP1P59025 MIR1291-201ENST00000627649 87 ntBASIC2.69□□□□□ -1.98
RTP1P59025 MTND5P18-201ENST00000445624 1801 ntBASIC2.69□□□□□ -1.98
RTP1P59025 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
RTP1P59025 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.68□□□□□ -1.98
RTP1P59025 SNORA1B-201ENST00000362535 133 ntBASIC2.68□□□□□ -1.98
RTP1P59025 MIR522-201ENST00000385071 87 ntBASIC2.68□□□□□ -1.98
RTP1P59025 MIR1262-201ENST00000408276 93 ntBASIC2.68□□□□□ -1.98
RTP1P59025 FTH1P12-201ENST00000432137 551 ntBASIC2.68□□□□□ -1.98
RTP1P59025 ATP5J2P3-201ENST00000451550 258 ntBASIC2.68□□□□□ -1.98
RTP1P59025 RNU6-1149P-201ENST00000516810 97 ntBASIC2.68□□□□□ -1.98
RTP1P59025 AC067747.1-201ENST00000608026 250 ntBASIC2.68□□□□□ -1.98
RTP1P59025 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RTP1P59025 Y_RNA.43-201ENST00000362670 111 ntBASIC2.67□□□□□ -1.98
RTP1P59025 RNA5SP323-201ENST00000391094 133 ntBASIC2.67□□□□□ -1.98
RTP1P59025 RNA5SP181-201ENST00000410246 98 ntBASIC2.67□□□□□ -1.98
RTP1P59025 SNRPGP13-201ENST00000442212 177 ntBASIC2.67□□□□□ -1.98
RTP1P59025 AL049830.1-201ENST00000468034 425 ntBASIC2.67□□□□□ -1.98
RTP1P59025 RPPH1-2P-201ENST00000516688 293 ntBASIC2.67□□□□□ -1.98
RTP1P59025 SCARNA15-202ENST00000516881 127 ntBASIC2.67□□□□□ -1.98
RTP1P59025 RNA5SP170-201ENST00000517150 101 ntBASIC2.67□□□□□ -1.98
RTP1P59025 AC087685.1-201ENST00000587507 141 ntBASIC2.67□□□□□ -1.98
RTP1P59025 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RTP1P59025 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RTP1P59025 MIR6073-201ENST00000352083 89 ntBASIC2.66□□□□□ -1.98
RTP1P59025 RNU6-880P-201ENST00000384526 107 ntBASIC2.66□□□□□ -1.98
RTP1P59025 SNORA8-201ENST00000384574 139 ntBASIC2.66□□□□□ -1.98
RTP1P59025 RNU6-1072P-201ENST00000384703 107 ntBASIC2.66□□□□□ -1.98
RTP1P59025 RNU6-443P-201ENST00000384780 107 ntBASIC2.66□□□□□ -1.98
RTP1P59025 MIR518F-201ENST00000384973 87 ntBASIC2.66□□□□□ -1.98
RTP1P59025 MIR1263-201ENST00000408324 86 ntBASIC2.66□□□□□ -1.98
RTP1P59025 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.66□□□□□ -1.98
RTP1P59025 AL163195.1-201ENST00000496941 348 ntBASIC2.66□□□□□ -1.98
RTP1P59025 AP002004.2-201ENST00000531656 154 ntBASIC2.66□□□□□ -1.98
RTP1P59025 AC022217.4-201ENST00000604389 163 ntBASIC2.66□□□□□ -1.98
RTP1P59025 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.66□□□□□ -1.98
RTP1P59025 MIR376A2-201ENST00000636782 80 ntBASIC2.66□□□□□ -1.98
RTP1P59025 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RTP1P59025 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RTP1P59025 Y_RNA.164-201ENST00000363709 102 ntBASIC2.65□□□□□ -1.99
RTP1P59025 RNU6-160P-201ENST00000384591 107 ntBASIC2.65□□□□□ -1.99
RTP1P59025 RNA5SP89-201ENST00000410300 108 ntBASIC2.65□□□□□ -1.99
RTP1P59025 RNU7-94P-201ENST00000459576 63 ntBASIC2.65□□□□□ -1.99
RTP1P59025 AC026436.1-201ENST00000510537 270 ntBASIC2.65□□□□□ -1.99
RTP1P59025 Y_RNA.714-201ENST00000517065 90 ntBASIC2.65□□□□□ -1.99
RTP1P59025 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
RTP1P59025 FO624990.1-201ENST00000636373 85 ntBASIC2.65□□□□□ -1.99
RTP1P59025 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
RTP1P59025 AC008555.8-201ENST00000623602 2168 ntBASIC2.65□□□□□ -1.99
RTP1P59025 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
RTP1P59025 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RTP1P59025 Y_RNA.4-201ENST00000362333 112 ntBASIC2.64□□□□□ -1.99
RTP1P59025 RNU6-862P-201ENST00000362804 105 ntBASIC2.64□□□□□ -1.99
RTP1P59025 Y_RNA.242-201ENST00000364473 110 ntBASIC2.64□□□□□ -1.99
RTP1P59025 Y_RNA.338-201ENST00000365320 114 ntBASIC2.64□□□□□ -1.99
RTP1P59025 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
RTP1P59025 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.64□□□□□ -1.99
RTP1P59025 CST2P1-201ENST00000425770 87 ntBASIC2.64□□□□□ -1.99
RTP1P59025 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.64□□□□□ -1.99
RTP1P59025 RNU6-168P-201ENST00000516189 101 ntBASIC2.64□□□□□ -1.99
RTP1P59025 AC024995.1-201ENST00000523014 93 ntBASIC2.64□□□□□ -1.99
RTP1P59025 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RTP1P59025 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
RTP1P59025 Y_RNA.528-201ENST00000384575 108 ntBASIC2.63□□□□□ -1.99
RTP1P59025 MIR515-2-201ENST00000384883 83 ntBASIC2.63□□□□□ -1.99
RTP1P59025 MIR515-1-201ENST00000384884 83 ntBASIC2.63□□□□□ -1.99
RTP1P59025 CALM2P4-201ENST00000430810 426 ntBASIC2.63□□□□□ -1.99
RTP1P59025 AL445687.1-201ENST00000439946 251 ntBASIC2.63□□□□□ -1.99
RTP1P59025 AC009238.1-201ENST00000442165 424 ntBASIC2.63□□□□□ -1.99
RTP1P59025 AC009237.6-201ENST00000446969 424 ntBASIC2.63□□□□□ -1.99
RTP1P59025 RPL23AP42-201ENST00000471152 471 ntBASIC2.63□□□□□ -1.99
RTP1P59025 RNU6-113P-201ENST00000516653 101 ntBASIC2.63□□□□□ -1.99
RTP1P59025 RNA5SP402-201ENST00000517148 110 ntBASIC2.63□□□□□ -1.99
RTP1P59025 MIR5007-201ENST00000583098 95 ntBASIC2.63□□□□□ -1.99
RTP1P59025 SNORD68-201ENST00000363214 84 ntBASIC2.62□□□□□ -1.99
RTP1P59025 RNU6-1255P-201ENST00000363434 112 ntBASIC2.62□□□□□ -1.99
RTP1P59025 RNA5SP493-201ENST00000364115 91 ntBASIC2.62□□□□□ -1.99
RTP1P59025 Y_RNA.366-201ENST00000365540 102 ntBASIC2.62□□□□□ -1.99
RTP1P59025 MIR548O-201ENST00000408583 114 ntBASIC2.62□□□□□ -1.99
RTP1P59025 MIR5197-201ENST00000583721 112 ntBASIC2.62□□□□□ -1.99
RTP1P59025 MIR4762-201ENST00000585261 75 ntBASIC2.62□□□□□ -1.99
RTP1P59025 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.62□□□□□ -1.99
RTP1P59025 Y_RNA.309-201ENST00000365046 111 ntBASIC2.61□□□□□ -1.99
RTP1P59025 RNA5SP136-201ENST00000410906 107 ntBASIC2.61□□□□□ -1.99
RTP1P59025 AC099677.2-201ENST00000436385 175 ntBASIC2.61□□□□□ -1.99
RTP1P59025 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.61□□□□□ -1.99
RTP1P59025 MIR4446-201ENST00000578505 67 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms