Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RNU6-47P-201ENST00000383866 107 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 RNU6-767P-201ENST00000384132 107 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 AC073415.1-201ENST00000449240 153 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 RNU7-187P-201ENST00000458985 68 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 RNU6-625P-201ENST00000459412 107 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 SNORA19.2-201ENST00000516013 114 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 RNA5SP476-201ENST00000516613 103 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 AP003168.1-201ENST00000530091 307 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 AL596211.1-201ENST00000569873 2277 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 MIR548AB-201ENST00000584917 84 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 AL157392.4-201ENST00000609756 345 ntBASIC-1.02□□□□□ -2.57
CCL3L1P16619 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 SNORD114-15-201ENST00000364687 72 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 RNU6-996P-201ENST00000365438 107 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 MIR635-201ENST00000384830 98 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 MIR516B1-201ENST00000385211 90 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 CYCSP46-201ENST00000423569 204 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 AC108059.2-201ENST00000434626 151 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 MIR548AX-201ENST00000580117 73 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 MIR4491-201ENST00000581087 68 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 AC008507.4-201ENST00000585464 127 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 JPX_2.1-201ENST00000614161 69 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 AP001506.1-201ENST00000615444 211 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 AC093726.3-201ENST00000637588 150 ntBASIC-1.03□□□□□ -2.57
CCL3L1P16619 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-34-201ENST00000362441 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-12-201ENST00000362583 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-29-201ENST00000362834 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-9-201ENST00000362912 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-21-201ENST00000362963 81 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-14-201ENST00000363090 81 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-13-201ENST00000363358 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-41-201ENST00000363608 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-11-201ENST00000363616 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-5-201ENST00000363633 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-39-201ENST00000363694 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-4-201ENST00000363810 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-16-201ENST00000363887 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-6-201ENST00000363942 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-42-201ENST00000364273 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-15-201ENST00000364809 81 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-1-201ENST00000364961 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-26-201ENST00000365067 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-10-201ENST00000365073 81 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 RNY4P3-201ENST00000365254 95 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-43-201ENST00000365503 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-36-201ENST00000365629 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORA69-201ENST00000383895 132 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 RNU6-926P-201ENST00000384075 107 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORA72.6-201ENST00000384520 129 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 U8.15-201ENST00000390947 134 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD110-201ENST00000408189 75 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 RNU6-437P-201ENST00000459408 95 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.04□□□□□ -2.58
CCL3L1P16619 AC011352.1-201ENST00000512300 793 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 IGKV1-22-201ENST00000524313 326 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 MIR5696-201ENST00000578474 85 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 AL022161.1-201ENST00000604390 213 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 SNORD115-40-201ENST00000606510 82 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 AC073534.2-201ENST00000620377 381 ntBASIC-1.04□□□□□ -2.58
CCL3L1P16619 RNU6-490P-201ENST00000362985 107 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 RNA5SP245-201ENST00000364239 121 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 RNU4-75P-201ENST00000364621 146 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 MTCO2P8-201ENST00000412213 658 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 BX295541.1-201ENST00000417774 250 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 USMG5P1-201ENST00000425964 177 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 BX276092.1-201ENST00000427368 251 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 RNU7-63P-201ENST00000459054 62 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 SNORA25.13-201ENST00000516395 103 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 AC024405.2-202ENST00000532731 184 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.05□□□□□ -2.58
CCL3L1P16619 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 RNU6-906P-201ENST00000384700 70 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 AC006210.1-201ENST00000424882 111 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 EIF1P2-201ENST00000428233 350 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 AL033528.1-201ENST00000453780 140 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 AC021146.6-201ENST00000514659 117 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 RNU6-138P-201ENST00000515952 107 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 SCARNA17-201ENST00000516183 144 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 RNU7-53P-201ENST00000516705 60 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.06□□□□□ -2.58
CCL3L1P16619 AP000942.4-201ENST00000604811 241 ntBASIC-1.06□□□□□ -2.58
CCL3L1P16619 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms