Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 POLR3GP1-201ENST00000594073 261 ntBASIC-0.28□□□□□ -2.45
UBBP0CG47 AL355297.3-201ENST00000604082 446 ntBASIC-0.28□□□□□ -2.45
UBBP0CG47 AC134878.1-201ENST00000619901 243 ntBASIC-0.28□□□□□ -2.45
UBBP0CG47 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 RNU6-740P-201ENST00000364734 105 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 MIR518F-201ENST00000384973 87 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 MT-TF-201ENST00000387314 71 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 MCFD2P1-201ENST00000417812 300 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 RNU7-73P-201ENST00000458743 63 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 RNU6-155P-201ENST00000516347 100 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 RNU6-504P-201ENST00000516568 104 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 MIR2355-201ENST00000517199 87 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 RNA5SP47-201ENST00000517230 109 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 JPX_2.1-201ENST00000614161 69 ntBASIC-0.29□□□□□ -2.46
UBBP0CG47 SNORD115-34-201ENST00000362441 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-12-201ENST00000362583 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-29-201ENST00000362834 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-9-201ENST00000362912 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-21-201ENST00000362963 81 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-14-201ENST00000363090 81 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-13-201ENST00000363358 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-41-201ENST00000363608 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-11-201ENST00000363616 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-5-201ENST00000363633 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-39-201ENST00000363694 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-4-201ENST00000363810 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-16-201ENST00000363887 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-6-201ENST00000363942 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-42-201ENST00000364273 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 RNU4-50P-201ENST00000364361 141 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 RNU4-75P-201ENST00000364621 146 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-15-201ENST00000364809 81 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-1-201ENST00000364961 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-26-201ENST00000365067 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-10-201ENST00000365073 81 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-43-201ENST00000365503 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-36-201ENST00000365629 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 AL590004.1-201ENST00000405321 300 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 MIR1287-201ENST00000408492 90 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 RNU6-602P-201ENST00000411155 105 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 AC074085.1-201ENST00000413598 418 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 AC236972.2-201ENST00000434979 310 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SUMO1P3-201ENST00000439961 304 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.3□□□□□ -2.46
UBBP0CG47 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.3□□□□□ -2.46
UBBP0CG47 AC091951.2-201ENST00000500762 203 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 RNU7-115P-201ENST00000516433 55 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 RNU7-25P-201ENST00000516544 62 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 AC131281.1-201ENST00000522984 164 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.3□□□□□ -2.46
UBBP0CG47 AP000942.4-201ENST00000604811 241 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 SNORD115-40-201ENST00000606510 82 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 Z99129.1-201ENST00000612510 255 ntBASIC-0.3□□□□□ -2.46
UBBP0CG47 U8.7-201ENST00000364940 136 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 SNORD38B-201ENST00000384690 67 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 MIR518E-201ENST00000385252 88 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 RNA5SP63-201ENST00000391225 112 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 HMGN1P33-201ENST00000432945 451 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 RNU7-165P-201ENST00000458864 60 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 MIR3152-201ENST00000579801 74 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 MIR3611-201ENST00000584484 83 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 AC005176.2-201ENST00000596933 147 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 AC022441.3-201ENST00000605737 136 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 MIR1244-1-201ENST00000612829 85 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 AC087588.2-201ENST00000617667 426 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 AC092794.2-201ENST00000620933 563 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 MIR1244-3-201ENST00000635744 85 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 MIR1244-2-201ENST00000636449 85 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 MIR1244-4-202ENST00000636813 85 ntBASIC-0.31□□□□□ -2.46
UBBP0CG47 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.32□□□□□ -2.46
UBBP0CG47 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 RNU6-20P-201ENST00000384106 107 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 SNORD116-8-201ENST00000384365 95 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 RNU6-269P-201ENST00000391077 97 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 SNORA75.4-201ENST00000391278 119 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 MIR1278-201ENST00000408753 81 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 RNU7-129P-201ENST00000516128 62 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 AC007751.1-201ENST00000529260 376 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.32□□□□□ -2.46
UBBP0CG47 AC022306.2-201ENST00000617563 647 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.32□□□□□ -2.46
UBBP0CG47 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.32□□□□□ -2.46
UBBP0CG47 MIR499B-201ENST00000636498 73 ntBASIC-0.32□□□□□ -2.46
UBBP0CG47 RNU6-674P-201ENST00000363831 107 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 RNU6-926P-201ENST00000384075 107 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 RNU6-938P-201ENST00000411285 103 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 AC096949.1-201ENST00000412047 152 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 MTND4P28-201ENST00000426217 387 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 AC098826.2-201ENST00000452011 651 ntBASIC-0.33□□□□□ -2.46
UBBP0CG47 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms