Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CD4P01730 Y_RNA.105-201ENST00000363182 111 ntBASIC1.28□□□□□ -2.2
CD4P01730 Y_RNA.152-201ENST00000363578 100 ntBASIC1.28□□□□□ -2.2
CD4P01730 RNU6-674P-201ENST00000363831 107 ntBASIC1.28□□□□□ -2.2
CD4P01730 U8.7-201ENST00000364940 136 ntBASIC1.28□□□□□ -2.2
CD4P01730 SNORA33.2-201ENST00000365413 134 ntBASIC1.28□□□□□ -2.2
CD4P01730 SNORA72.4-201ENST00000384174 132 ntBASIC1.28□□□□□ -2.2
CD4P01730 RNU6-121P-201ENST00000410525 99 ntBASIC1.28□□□□□ -2.2
CD4P01730 RNU6-437P-201ENST00000459408 95 ntBASIC1.28□□□□□ -2.2
CD4P01730 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
CD4P01730 RNU7-43P-201ENST00000516554 64 ntBASIC1.28□□□□□ -2.2
CD4P01730 AC037487.3-201ENST00000606668 112 ntBASIC1.28□□□□□ -2.2
CD4P01730 MIR6779-201ENST00000617283 64 ntBASIC1.28□□□□□ -2.2
CD4P01730 RNU6-770P-201ENST00000363929 105 ntBASIC1.27□□□□□ -2.21
CD4P01730 Y_RNA.214-201ENST00000364201 112 ntBASIC1.27□□□□□ -2.21
CD4P01730 RNU6-442P-201ENST00000383968 104 ntBASIC1.27□□□□□ -2.21
CD4P01730 SNORD38C-201ENST00000384381 69 ntBASIC1.27□□□□□ -2.21
CD4P01730 Y_RNA.569-201ENST00000384749 103 ntBASIC1.27□□□□□ -2.21
CD4P01730 MIR19B1-201ENST00000384829 87 ntBASIC1.27□□□□□ -2.21
CD4P01730 MIR598-201ENST00000384868 97 ntBASIC1.27□□□□□ -2.21
CD4P01730 ELOCP20-201ENST00000422460 345 ntBASIC1.27□□□□□ -2.21
CD4P01730 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
CD4P01730 SNORD79.1-201ENST00000516069 84 ntBASIC1.27□□□□□ -2.21
CD4P01730 RNU6-1143P-201ENST00000516125 104 ntBASIC1.27□□□□□ -2.21
CD4P01730 RNU6-191P-201ENST00000516295 94 ntBASIC1.27□□□□□ -2.21
CD4P01730 RNU6-113P-201ENST00000516653 101 ntBASIC1.27□□□□□ -2.21
CD4P01730 AC090142.3-201ENST00000519012 385 ntBASIC1.27□□□□□ -2.21
CD4P01730 RNU6-899P-201ENST00000363947 107 ntBASIC1.26□□□□□ -2.21
CD4P01730 Y_RNA.210-201ENST00000364161 110 ntBASIC1.26□□□□□ -2.21
CD4P01730 SNORD50B-201ENST00000364995 70 ntBASIC1.26□□□□□ -2.21
CD4P01730 RNU6-290P-201ENST00000365212 101 ntBASIC1.26□□□□□ -2.21
CD4P01730 RNU6-639P-201ENST00000384074 107 ntBASIC1.26□□□□□ -2.21
CD4P01730 SNORA36B-201ENST00000410438 131 ntBASIC1.26□□□□□ -2.21
CD4P01730 AC063976.4-201ENST00000421971 163 ntBASIC1.26□□□□□ -2.21
CD4P01730 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.26□□□□□ -2.21
CD4P01730 AC245047.8-201ENST00000456455 284 ntBASIC1.26□□□□□ -2.21
CD4P01730 AL391903.3-201ENST00000612158 163 ntBASIC1.26□□□□□ -2.21
CD4P01730 AC012676.2-201ENST00000619258 186 ntBASIC1.26□□□□□ -2.21
CD4P01730 Y_RNA.19-201ENST00000362462 99 ntBASIC1.25□□□□□ -2.21
CD4P01730 Y_RNA.153-201ENST00000363615 91 ntBASIC1.25□□□□□ -2.21
CD4P01730 RNA5SP48-201ENST00000363969 126 ntBASIC1.25□□□□□ -2.21
CD4P01730 RNU6-801P-201ENST00000364087 105 ntBASIC1.25□□□□□ -2.21
CD4P01730 RNU6-144P-201ENST00000383951 107 ntBASIC1.25□□□□□ -2.21
CD4P01730 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CD4P01730 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
CD4P01730 RNU7-141P-201ENST00000459304 62 ntBASIC1.25□□□□□ -2.21
CD4P01730 RNU6-764P-201ENST00000516396 105 ntBASIC1.25□□□□□ -2.21
CD4P01730 RNU6-1153P-201ENST00000516760 105 ntBASIC1.25□□□□□ -2.21
CD4P01730 RNU6-1137P-201ENST00000517073 99 ntBASIC1.25□□□□□ -2.21
CD4P01730 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.25□□□□□ -2.21
CD4P01730 MIR373-201ENST00000362273 69 ntBASIC1.24□□□□□ -2.21
CD4P01730 RNU6-1209P-201ENST00000363655 107 ntBASIC1.24□□□□□ -2.21
CD4P01730 MIR520C-201ENST00000385005 87 ntBASIC1.24□□□□□ -2.21
CD4P01730 MIR516B2-201ENST00000385190 85 ntBASIC1.24□□□□□ -2.21
CD4P01730 SNORA53-201ENST00000391141 249 ntBASIC1.24□□□□□ -2.21
CD4P01730 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.24□□□□□ -2.21
CD4P01730 RNU6-985P-201ENST00000410182 104 ntBASIC1.24□□□□□ -2.21
CD4P01730 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.24□□□□□ -2.21
CD4P01730 MTCO1P5-201ENST00000433573 344 ntBASIC1.24□□□□□ -2.21
CD4P01730 AC023449.1-201ENST00000454464 154 ntBASIC1.24□□□□□ -2.21
CD4P01730 RNY3P15-201ENST00000516297 97 ntBASIC1.24□□□□□ -2.21
CD4P01730 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.24□□□□□ -2.21
CD4P01730 AL096861.1-201ENST00000610899 123 ntBASIC1.24□□□□□ -2.21
CD4P01730 snoU2_19.2-201ENST00000363024 80 ntBASIC1.23□□□□□ -2.21
CD4P01730 RNU6-1048P-201ENST00000364054 107 ntBASIC1.23□□□□□ -2.21
CD4P01730 RNU6-514P-201ENST00000384208 107 ntBASIC1.23□□□□□ -2.21
CD4P01730 MIR200A-201ENST00000384875 90 ntBASIC1.23□□□□□ -2.21
CD4P01730 SNORA26.5-201ENST00000391215 123 ntBASIC1.23□□□□□ -2.21
CD4P01730 RNU2-14P-201ENST00000411053 191 ntBASIC1.23□□□□□ -2.21
CD4P01730 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.23□□□□□ -2.21
CD4P01730 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
CD4P01730 HSPE1P19-201ENST00000603327 295 ntBASIC1.23□□□□□ -2.21
CD4P01730 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
CD4P01730 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CD4P01730 AL391516.1-201ENST00000554380 2449 ntBASIC1.23□□□□□ -2.21
CD4P01730 RNU6-326P-201ENST00000365480 107 ntBASIC1.22□□□□□ -2.21
CD4P01730 Y_RNA.541-201ENST00000384640 113 ntBASIC1.22□□□□□ -2.21
CD4P01730 RPL21P38-201ENST00000418090 167 ntBASIC1.22□□□□□ -2.21
CD4P01730 AL731563.1-201ENST00000442202 214 ntBASIC1.22□□□□□ -2.21
CD4P01730 AC098869.1-201ENST00000481627 292 ntBASIC1.22□□□□□ -2.21
CD4P01730 MRPS35P2-201ENST00000508242 191 ntBASIC1.22□□□□□ -2.21
CD4P01730 RNA5SP436-201ENST00000516020 115 ntBASIC1.22□□□□□ -2.21
CD4P01730 RNU2-31P-201ENST00000516954 155 ntBASIC1.22□□□□□ -2.21
CD4P01730 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.22□□□□□ -2.21
CD4P01730 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.22□□□□□ -2.21
CD4P01730 AC005357.1-201ENST00000588399 301 ntBASIC1.22□□□□□ -2.21
CD4P01730 AL512605.2-201ENST00000592972 256 ntBASIC1.22□□□□□ -2.21
CD4P01730 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
CD4P01730 AL442644.1-201ENST00000454390 3105 ntBASIC1.22□□□□□ -2.21
CD4P01730 RNA5SP325-201ENST00000363756 130 ntBASIC1.21□□□□□ -2.22
CD4P01730 RNU6-806P-201ENST00000365147 105 ntBASIC1.21□□□□□ -2.22
CD4P01730 Y_RNA.370-201ENST00000365589 108 ntBASIC1.21□□□□□ -2.22
CD4P01730 Y_RNA.422-201ENST00000384054 114 ntBASIC1.21□□□□□ -2.22
CD4P01730 RNU6-1067P-201ENST00000384752 107 ntBASIC1.21□□□□□ -2.22
CD4P01730 RNU7-90P-201ENST00000459216 62 ntBASIC1.21□□□□□ -2.22
CD4P01730 SNORD123-201ENST00000459473 70 ntBASIC1.21□□□□□ -2.22
CD4P01730 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.21□□□□□ -2.22
CD4P01730 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
CD4P01730 RNU6-830P-201ENST00000516353 107 ntBASIC1.21□□□□□ -2.22
CD4P01730 SNORA18.7-201ENST00000516910 131 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms