Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL445646.1-201ENST00000431784 216 ntBASIC2.93□□□□□ -1.94
SOX1O00570 HMGN2P32-201ENST00000444648 269 ntBASIC2.93□□□□□ -1.94
SOX1O00570 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.93□□□□□ -1.94
SOX1O00570 RPL39P34-201ENST00000477141 156 ntBASIC2.93□□□□□ -1.94
SOX1O00570 RN7SL297P-201ENST00000483161 293 ntBASIC2.93□□□□□ -1.94
SOX1O00570 SNORA64.4-201ENST00000516632 81 ntBASIC2.93□□□□□ -1.94
SOX1O00570 RNY4P20-201ENST00000516678 93 ntBASIC2.93□□□□□ -1.94
SOX1O00570 AL035470.1-201ENST00000622571 220 ntBASIC2.93□□□□□ -1.94
SOX1O00570 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
SOX1O00570 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SOX1O00570 RNA5SP493-201ENST00000364115 91 ntBASIC2.92□□□□□ -1.94
SOX1O00570 RNU1-133P-201ENST00000364867 167 ntBASIC2.92□□□□□ -1.94
SOX1O00570 Y_RNA.440-201ENST00000384120 114 ntBASIC2.92□□□□□ -1.94
SOX1O00570 SNORA80E-201ENST00000384744 137 ntBASIC2.92□□□□□ -1.94
SOX1O00570 MIR7-2-201ENST00000384970 110 ntBASIC2.92□□□□□ -1.94
SOX1O00570 MIR1302-4-201ENST00000408701 150 ntBASIC2.92□□□□□ -1.94
SOX1O00570 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
SOX1O00570 AC087499.4-201ENST00000448505 178 ntBASIC2.92□□□□□ -1.94
SOX1O00570 MIR4778-201ENST00000577635 80 ntBASIC2.92□□□□□ -1.94
SOX1O00570 AC021443.1-201ENST00000604478 211 ntBASIC2.92□□□□□ -1.94
SOX1O00570 AL449363.1-201ENST00000617815 186 ntBASIC2.92□□□□□ -1.94
SOX1O00570 U4atac.1-201ENST00000618345 95 ntBASIC2.92□□□□□ -1.94
SOX1O00570 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SOX1O00570 AC245060.5-201ENST00000610778 3293 ntBASIC2.92□□□□□ -1.94
SOX1O00570 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.91□□□□□ -1.94
SOX1O00570 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SOX1O00570 RNU6-414P-201ENST00000363705 104 ntBASIC2.91□□□□□ -1.94
SOX1O00570 Y_RNA.362-201ENST00000365518 110 ntBASIC2.91□□□□□ -1.94
SOX1O00570 RNY1P6-201ENST00000384193 109 ntBASIC2.91□□□□□ -1.94
SOX1O00570 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.91□□□□□ -1.94
SOX1O00570 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.91□□□□□ -1.94
SOX1O00570 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.91□□□□□ -1.94
SOX1O00570 AC104027.1-201ENST00000521887 300 ntBASIC2.91□□□□□ -1.94
SOX1O00570 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.91□□□□□ -1.94
SOX1O00570 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.91□□□□□ -1.94
SOX1O00570 AC073476.4-201ENST00000628409 72 ntBASIC2.91□□□□□ -1.94
SOX1O00570 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SOX1O00570 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
SOX1O00570 RNA5SP383-201ENST00000362934 120 ntBASIC2.9□□□□□ -1.95
SOX1O00570 RNU6-640P-201ENST00000363693 105 ntBASIC2.9□□□□□ -1.95
SOX1O00570 Y_RNA.265-201ENST00000364677 108 ntBASIC2.9□□□□□ -1.95
SOX1O00570 Y_RNA.298-201ENST00000364960 107 ntBASIC2.9□□□□□ -1.95
SOX1O00570 U8.17-201ENST00000391292 132 ntBASIC2.9□□□□□ -1.95
SOX1O00570 RNU6-938P-201ENST00000411285 103 ntBASIC2.9□□□□□ -1.95
SOX1O00570 RPL32P35-201ENST00000415214 394 ntBASIC2.9□□□□□ -1.95
SOX1O00570 AC245047.3-201ENST00000429428 127 ntBASIC2.9□□□□□ -1.95
SOX1O00570 RNU7-80P-201ENST00000459562 61 ntBASIC2.9□□□□□ -1.95
SOX1O00570 RNA5SP320-201ENST00000516263 124 ntBASIC2.9□□□□□ -1.95
SOX1O00570 SNORA40.13-201ENST00000516379 120 ntBASIC2.9□□□□□ -1.95
SOX1O00570 SNORD36C-201ENST00000516733 66 ntBASIC2.9□□□□□ -1.95
SOX1O00570 AP003484.1-201ENST00000530974 250 ntBASIC2.9□□□□□ -1.95
SOX1O00570 AC024614.2-201ENST00000577584 372 ntBASIC2.9□□□□□ -1.95
SOX1O00570 MIR3169-201ENST00000578032 83 ntBASIC2.9□□□□□ -1.95
SOX1O00570 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.9□□□□□ -1.95
SOX1O00570 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SOX1O00570 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.9□□□□□ -1.95
SOX1O00570 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SOX1O00570 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SOX1O00570 SNORD56.3-201ENST00000363507 71 ntBASIC2.89□□□□□ -1.95
SOX1O00570 Y_RNA.351-201ENST00000365436 96 ntBASIC2.89□□□□□ -1.95
SOX1O00570 Y_RNA.544-201ENST00000384650 113 ntBASIC2.89□□□□□ -1.95
SOX1O00570 SNORA11.4-201ENST00000408823 129 ntBASIC2.89□□□□□ -1.95
SOX1O00570 RNA5SP217-201ENST00000515959 91 ntBASIC2.89□□□□□ -1.95
SOX1O00570 SNORA18.7-201ENST00000516910 131 ntBASIC2.89□□□□□ -1.95
SOX1O00570 SCARNA20.6-201ENST00000517251 106 ntBASIC2.89□□□□□ -1.95
SOX1O00570 SUMO2P16-201ENST00000519475 264 ntBASIC2.89□□□□□ -1.95
SOX1O00570 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.89□□□□□ -1.95
SOX1O00570 MIR5009-201ENST00000578736 100 ntBASIC2.89□□□□□ -1.95
SOX1O00570 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SOX1O00570 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SOX1O00570 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SOX1O00570 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.88□□□□□ -1.95
SOX1O00570 U8.6-201ENST00000364939 135 ntBASIC2.88□□□□□ -1.95
SOX1O00570 Y_RNA.454-201ENST00000384224 113 ntBASIC2.88□□□□□ -1.95
SOX1O00570 AL356320.1-201ENST00000429616 163 ntBASIC2.88□□□□□ -1.95
SOX1O00570 RNU7-164P-201ENST00000459221 62 ntBASIC2.88□□□□□ -1.95
SOX1O00570 AC006483.1-201ENST00000487308 313 ntBASIC2.88□□□□□ -1.95
SOX1O00570 AC068339.1-201ENST00000526965 141 ntBASIC2.88□□□□□ -1.95
SOX1O00570 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.88□□□□□ -1.95
SOX1O00570 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SOX1O00570 RNU6-23P-201ENST00000363283 107 ntBASIC2.87□□□□□ -1.95
SOX1O00570 AL627390.1-201ENST00000396055 340 ntBASIC2.87□□□□□ -1.95
SOX1O00570 AL445687.1-201ENST00000439946 251 ntBASIC2.87□□□□□ -1.95
SOX1O00570 RNU6-830P-201ENST00000516353 107 ntBASIC2.87□□□□□ -1.95
SOX1O00570 MIR1273D-201ENST00000577266 86 ntBASIC2.87□□□□□ -1.95
SOX1O00570 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.87□□□□□ -1.95
SOX1O00570 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SOX1O00570 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SOX1O00570 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SOX1O00570 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.87□□□□□ -1.95
SOX1O00570 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SOX1O00570 RNU6-294P-201ENST00000364999 102 ntBASIC2.86□□□□□ -1.95
SOX1O00570 MT-TI-201ENST00000387365 69 ntBASIC2.86□□□□□ -1.95
SOX1O00570 RNU6-440P-201ENST00000390882 105 ntBASIC2.86□□□□□ -1.95
SOX1O00570 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SOX1O00570 AL606517.2-201ENST00000442855 241 ntBASIC2.86□□□□□ -1.95
SOX1O00570 AC011753.1-201ENST00000451001 220 ntBASIC2.86□□□□□ -1.95
SOX1O00570 RNU1-143P-201ENST00000516296 146 ntBASIC2.86□□□□□ -1.95
SOX1O00570 RNU6-970P-201ENST00000516312 107 ntBASIC2.86□□□□□ -1.95
SOX1O00570 AC026271.5-201ENST00000577873 130 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms