Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC087685.1-201ENST00000587507 141 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 7SK.8-201ENST00000612110 250 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 7SK.11-201ENST00000615477 250 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 7SK.13-201ENST00000622040 250 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.19
LRRC53A6NM62 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LRRC53A6NM62 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LRRC53A6NM62 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LRRC53A6NM62 Y_RNA.14-201ENST00000362415 103 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.82-201ENST00000363000 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.92-201ENST00000363043 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.235-201ENST00000364412 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.306-201ENST00000365015 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.312-201ENST00000365089 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.322-201ENST00000365151 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 MIR1302-3-201ENST00000408128 138 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.590-201ENST00000410140 107 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.650-201ENST00000459002 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.777-201ENST00000516982 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC53A6NM62 AC015712.3-201ENST00000559380 164 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.771-201ENST00000598668 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 AC006006.1-201ENST00000603082 144 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 AL021707.8-201ENST00000609428 183 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.802-201ENST00000614892 130 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.789-201ENST00000622480 102 ntBASIC1.39□□□□□ -2.19
LRRC53A6NM62 Y_RNA.24-201ENST00000362508 103 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 Y_RNA.54-201ENST00000362766 105 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 RNU1-17P-201ENST00000363022 152 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 Y_RNA.122-201ENST00000363331 96 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 Y_RNA.277-201ENST00000364754 102 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 Y_RNA.352-201ENST00000365439 102 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 RNU6-442P-201ENST00000383968 104 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 MIR136-201ENST00000385207 82 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 MIR526A2-201ENST00000390198 65 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 SNRPGP14-201ENST00000435400 219 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 RNU6-1132P-201ENST00000459214 107 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 Y_RNA.668-201ENST00000516233 93 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 RNU6-947P-201ENST00000516264 106 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 AC090821.2-201ENST00000523552 176 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 AL049861.1-201ENST00000603130 150 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 ZNF209P-201ENST00000593450 2304 ntBASIC1.38□□□□□ -2.19
LRRC53A6NM62 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
LRRC53A6NM62 Y_RNA.556-201ENST00000384677 113 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 MIR802-201ENST00000390235 94 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 RNA5SP496-201ENST00000391240 109 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 Y_RNA.679-201ENST00000516416 91 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC53A6NM62 MIR4524B-201ENST00000581569 115 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 MIR4503-201ENST00000582187 83 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 MIR4282-201ENST00000583613 67 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 uc_338.4-201ENST00000616635 176 ntBASIC1.37□□□□□ -2.19
LRRC53A6NM62 RNU6-268P-201ENST00000364174 107 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 RNU6-574P-201ENST00000384265 107 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 SNORA8.3-201ENST00000384679 139 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 Y_RNA.562-201ENST00000384695 113 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 MIR626-201ENST00000385032 94 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 MIR764-201ENST00000390811 85 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 SNORA17.3-201ENST00000391159 129 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 AC023449.1-201ENST00000454464 154 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 AC245047.8-201ENST00000456455 284 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.36□□□□□ -2.19
LRRC53A6NM62 RNU6-1007P-201ENST00000516586 107 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 SNORA18.7-201ENST00000516910 131 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 AC100767.1-201ENST00000528178 123 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 U4.1-201ENST00000620349 87 ntBASIC1.36□□□□□ -2.19
LRRC53A6NM62 Y_RNA.76-201ENST00000362931 109 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 SNORD26-201ENST00000384147 75 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 RNU6-196P-201ENST00000384315 107 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 RNU7-149P-201ENST00000516739 59 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 SNORA74.3-201ENST00000517108 154 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 MIR3660-201ENST00000584845 100 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 AL357312.1-201ENST00000603879 298 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 AL353997.5-201ENST00000618886 171 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 MIR8065-201ENST00000620577 100 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
LRRC53A6NM62 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.35□□□□□ -2.19
LRRC53A6NM62 Y_RNA.477-201ENST00000384352 108 ntBASIC1.34□□□□□ -2.19
LRRC53A6NM62 SNORD38C-201ENST00000384381 69 ntBASIC1.34□□□□□ -2.19
LRRC53A6NM62 MTND1P19-201ENST00000511780 315 ntBASIC1.34□□□□□ -2.19
LRRC53A6NM62 MIR5688-201ENST00000580619 83 ntBASIC1.34□□□□□ -2.19
LRRC53A6NM62 AL162730.1-201ENST00000605734 292 ntBASIC1.34□□□□□ -2.19
LRRC53A6NM62 AL096861.1-201ENST00000610899 123 ntBASIC1.34□□□□□ -2.19
LRRC53A6NM62 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.34□□□□□ -2.19
LRRC53A6NM62 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
LRRC53A6NM62 SNORD27-201ENST00000363981 72 ntBASIC1.33□□□□□ -2.2
LRRC53A6NM62 Y_RNA.229-201ENST00000364347 113 ntBASIC1.33□□□□□ -2.2
LRRC53A6NM62 Y_RNA.416-201ENST00000384014 113 ntBASIC1.33□□□□□ -2.2
LRRC53A6NM62 Y_RNA.587-201ENST00000391210 103 ntBASIC1.33□□□□□ -2.2
LRRC53A6NM62 MIR548H3-201ENST00000408771 118 ntBASIC1.33□□□□□ -2.2
LRRC53A6NM62 Y_RNA.638-201ENST00000459374 113 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms