Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 AC002984.1-201ENST00000591692 448 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 AL021707.8-201ENST00000609428 183 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.238-201ENST00000364441 102 ntBASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR802-201ENST00000390235 94 ntBASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 SNORA26-201ENST00000391286 122 ntBASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-493P-201ENST00000391321 108 ntBASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 JTBP1-201ENST00000441314 247 ntBASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 SNORD11-201ENST00000459124 84 ntBASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR4744-201ENST00000581563 82 ntBASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
PCDHGA3Q9Y5H0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR424-201ENST00000362227 98 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-923P-201ENST00000364753 107 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.571-201ENST00000384753 98 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 RPL23AP42-201ENST00000471152 471 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 RNY3P16-201ENST00000516338 101 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 AC021506.2-201ENST00000612354 169 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR8074-201ENST00000615081 81 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
PCDHGA3Q9Y5H0 AC068700.1-201ENST00000565862 3754 ntBASIC2.09□□□□□ -2.08
PCDHGA3Q9Y5H0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-1138P-201ENST00000365359 106 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-728P-201ENST00000365375 104 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-424P-201ENST00000384367 105 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-163P-201ENST00000384396 106 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORA48.3-201ENST00000391081 134 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-918P-201ENST00000391219 106 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 MIR1278-201ENST00000408753 81 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 RNA5SP168-201ENST00000516642 112 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 AP002392.1-201ENST00000537692 208 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 AC120024.3-201ENST00000603167 156 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 AL096840.1-201ENST00000603287 93 ntBASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-833P-201ENST00000363486 107 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORD14E-201ENST00000364009 85 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 snoU2_19.4-201ENST00000364329 80 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 MIR891A-201ENST00000401237 79 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORA79-201ENST00000408376 140 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 MIR1267-201ENST00000408723 78 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 MTND5P15-201ENST00000434246 349 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 Y_RNA.797-201ENST00000515977 94 ntBASIC2.07□□□□□ -2.08
PCDHGA3Q9Y5H0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-442P-201ENST00000383968 104 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 MIR660-201ENST00000385235 97 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 AL606845.1-201ENST00000404881 255 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 AC245047.8-201ENST00000456455 284 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU7-120P-201ENST00000459334 63 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU7-12P-201ENST00000516030 62 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORD77.4-201ENST00000516158 81 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORD45.4-201ENST00000516629 73 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 MIR4308-201ENST00000580634 81 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 AL049861.1-201ENST00000603130 150 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORD3E-202ENST00000627253 216 ntBASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
PCDHGA3Q9Y5H0 Y_RNA.233-201ENST00000364407 101 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 MIR30A-201ENST00000385092 71 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 SNORA12.1-201ENST00000390873 148 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 AC004965.1-201ENST00000413033 213 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 CALM2P4-201ENST00000430810 426 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 AC099513.1-201ENST00000490423 301 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-1299P-201ENST00000516316 100 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 MIR3198-2-201ENST00000577868 80 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 AC008507.4-201ENST00000585464 127 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 AC004792.1-201ENST00000614523 137 ntBASIC2.05□□□□□ -2.08
PCDHGA3Q9Y5H0 MIRLET7C-201ENST00000362160 84 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 Y_RNA.75-201ENST00000362927 97 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-312P-201ENST00000364629 107 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 Y_RNA.572-201ENST00000384757 98 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6-578P-201ENST00000390980 103 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 U8.16-201ENST00000391279 133 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 AL023284.1-201ENST00000403956 276 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU2-2P-201ENST00000410396 191 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 RNU2-64P-201ENST00000411315 191 ntBASIC2.04□□□□□ -2.08
PCDHGA3Q9Y5H0 AL445646.1-201ENST00000431784 216 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms