Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL117342.1-201ENST00000404861 406 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 MIR1278-201ENST00000408753 81 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 RNA5SP511-201ENST00000410487 115 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 RNU5E-9P-201ENST00000411164 104 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 AC245047.4-201ENST00000433189 144 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 HMGN2P34-201ENST00000437647 269 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 AC097462.1-201ENST00000514125 324 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 SCARNA8-201ENST00000515924 131 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 MRPS18CP4-201ENST00000535821 231 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 MIR548AY-201ENST00000617669 107 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 U6.73-201ENST00000619194 103 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 U6.108-201ENST00000637764 58 ntBASIC1.73□□□□□ -2.13
DDX43Q9NXZ2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 MIR526A2-201ENST00000390198 65 ntBASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 CST2P1-201ENST00000425770 87 ntBASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 AL162725.1-201ENST00000435405 301 ntBASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 AC117454.1-201ENST00000491120 168 ntBASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 AC127455.1-201ENST00000565496 145 ntBASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 MIR338-201ENST00000636369 67 ntBASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 AC068647.2-201ENST00000637380 353 ntBASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
DDX43Q9NXZ2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
DDX43Q9NXZ2 Y_RNA.7-201ENST00000362352 102 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 snoU2-30.2-201ENST00000362805 70 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.121-201ENST00000363309 113 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 SNORA33-201ENST00000363664 130 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 RNU6-414P-201ENST00000363705 104 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.412-201ENST00000384001 104 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.441-201ENST00000384123 112 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 RNU6-394P-201ENST00000410735 107 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 RNU2-7P-201ENST00000410794 178 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 RNU6-1135P-201ENST00000411083 103 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 RN7SKP101-201ENST00000411376 320 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 RPS27P22-201ENST00000478056 241 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 MIR5688-201ENST00000580619 83 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 MIR4438-201ENST00000585271 93 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 AC005972.2-201ENST00000604690 348 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 RNU2-4P-201ENST00000606190 192 ntBASIC1.71□□□□□ -2.14
DDX43Q9NXZ2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.75-201ENST00000362927 97 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 RNU6-1205P-201ENST00000363625 106 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 SNORA67.5-201ENST00000391036 107 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 SNORA36B-201ENST00000410438 131 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 AC069257.2-201ENST00000441819 155 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 WWP1P1-201ENST00000466609 2769 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.662-201ENST00000516028 97 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 RNU6-453P-201ENST00000516819 85 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 AC084364.2-201ENST00000546924 395 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 MIR4303-201ENST00000581299 66 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 snoU13.31-201ENST00000607291 104 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.802-201ENST00000614892 130 ntBASIC1.7□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.24-201ENST00000362508 103 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 RNU6-674P-201ENST00000363831 107 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.293-201ENST00000364908 93 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 RNU6-969P-201ENST00000383900 105 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 RNU6-144P-201ENST00000383951 107 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 SNORA8.3-201ENST00000384679 139 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 RNU6-417P-201ENST00000384712 107 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 RNU6-383P-201ENST00000410864 94 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 RPS4XP11-201ENST00000446897 772 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 snoU13.9-201ENST00000458927 103 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 AC005908.1-201ENST00000468701 347 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 RN7SKP164-201ENST00000516138 266 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 RNA5SP481-201ENST00000516814 122 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 RNA5SP437-201ENST00000517249 129 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 AL137100.2-201ENST00000555786 315 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 AC091178.2-201ENST00000584401 117 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 POLR3GP1-201ENST00000594073 261 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 AL021707.8-201ENST00000609428 183 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 AC021753.1-201ENST00000635724 168 ntBASIC1.69□□□□□ -2.14
DDX43Q9NXZ2 MIR378A-201ENST00000362177 66 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 MIR126-201ENST00000362291 85 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.170-201ENST00000363746 110 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.229-201ENST00000364347 113 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 SNORA63D-201ENST00000364359 132 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 RNU6-275P-201ENST00000364910 107 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.506-201ENST00000384494 102 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 MIR616-201ENST00000385293 97 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 RNU6-360P-201ENST00000390944 104 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 RNA5SP467-201ENST00000391274 118 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 MIR1267-201ENST00000408723 78 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 FTH1P12-201ENST00000432137 551 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 RNU7-116P-201ENST00000516940 62 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 RNU7-172P-201ENST00000517125 64 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 268 ms