Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MIR4251-201ENST00000635819 61 ntBASIC0.39□□□□□ -2.35
PCDH11XQ9BZA7 Y_RNA.230-201ENST00000364348 109 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 Y_RNA.446-201ENST00000384178 104 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-1215P-201ENST00000384441 102 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 Y_RNA.518-201ENST00000384552 113 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 MIR1302-7-201ENST00000408841 72 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-613P-201ENST00000410412 108 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-710P-201ENST00000410424 105 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-1304P-201ENST00000411374 106 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 AL390729.2-201ENST00000416137 156 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 PRDX4P1-201ENST00000507189 574 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-1012P-201ENST00000516606 109 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU7-4P-201ENST00000516961 62 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 AP003327.1-201ENST00000529684 127 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 AC087685.1-201ENST00000587507 141 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-94P-201ENST00000607728 107 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 MIR1-1-201ENST00000362147 71 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 Y_RNA.172-201ENST00000363765 102 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-324P-201ENST00000363957 106 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 Y_RNA.368-201ENST00000365547 113 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-1323P-201ENST00000384025 107 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 SNORD38C-201ENST00000384381 69 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 SNORD105-201ENST00000386910 85 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 SNORD78.2-201ENST00000391076 69 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-192P-201ENST00000391253 100 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-1199P-201ENST00000411249 104 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 MTND1P34-201ENST00000438556 671 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 MIR2115-201ENST00000516657 100 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 RNU7-116P-201ENST00000516940 62 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 AC011195.1-201ENST00000578177 177 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 AC060780.3-201ENST00000589464 80 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 MIR6516-201ENST00000630554 81 ntBASIC0.38□□□□□ -2.35
PCDH11XQ9BZA7 Y_RNA.6-201ENST00000362350 114 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 Y_RNA.60-201ENST00000362831 98 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-626P-201ENST00000363354 107 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 SNORD14E-201ENST00000364009 85 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-945P-201ENST00000383947 107 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-926P-201ENST00000384075 107 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-20P-201ENST00000384106 107 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 RNA5SP299-201ENST00000391203 116 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 MIR548F1-201ENST00000408667 84 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-155P-201ENST00000516347 100 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-830P-201ENST00000516353 107 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 AL355375.2-201ENST00000574825 175 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 MIR548AR-201ENST00000582191 57 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 AL355073.2-201ENST00000612106 557 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 AL669831.3-213ENST00000636676 183 ntBASIC0.37□□□□□ -2.35
PCDH11XQ9BZA7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 SNORD116-4-201ENST00000384733 96 ntBASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-718P-201ENST00000516166 105 ntBASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-911P-201ENST00000516523 104 ntBASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-358P-201ENST00000516564 75 ntBASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 MIR4636-201ENST00000582271 80 ntBASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 AC022441.3-201ENST00000605737 136 ntBASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.36□□□□□ -2.35
PCDH11XQ9BZA7 RNU6-396P-201ENST00000365369 105 ntBASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 SNORA2B-201ENST00000384583 137 ntBASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 SNORA75.6-201ENST00000391318 127 ntBASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 MIR1912-201ENST00000410389 80 ntBASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 MTND1P2-201ENST00000430604 821 ntBASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 RNU7-30P-201ENST00000516835 62 ntBASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 MIR4300-201ENST00000581016 96 ntBASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 MIR6718-201ENST00000616153 80 ntBASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
PCDH11XQ9BZA7 Y_RNA.146-201ENST00000363549 102 ntBASIC0.34□□□□□ -2.36
PCDH11XQ9BZA7 Y_RNA.148-201ENST00000363557 117 ntBASIC0.34□□□□□ -2.36
PCDH11XQ9BZA7 RNU6-654P-201ENST00000364373 107 ntBASIC0.34□□□□□ -2.36
PCDH11XQ9BZA7 RNU6-442P-201ENST00000383968 104 ntBASIC0.34□□□□□ -2.36
PCDH11XQ9BZA7 RNA5SP222-201ENST00000411039 105 ntBASIC0.34□□□□□ -2.36
PCDH11XQ9BZA7 MCFD2P1-201ENST00000417812 300 ntBASIC0.34□□□□□ -2.36
PCDH11XQ9BZA7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.34□□□□□ -2.36
PCDH11XQ9BZA7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.34□□□□□ -2.36
PCDH11XQ9BZA7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.34□□□□□ -2.36
PCDH11XQ9BZA7 Y_RNA.318-201ENST00000365131 97 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 Y_RNA.376-201ENST00000365638 108 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 RNU6-767P-201ENST00000384132 107 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 RNU6-177P-201ENST00000411257 104 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 Y_RNA.635-201ENST00000459041 101 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 Y_RNA.691-201ENST00000516611 103 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 MIR5690-201ENST00000583739 73 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 POLR3GP1-201ENST00000594073 261 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 Pinc.1-201ENST00000616452 154 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 AC098679.4-201ENST00000624241 654 ntBASIC0.33□□□□□ -2.36
PCDH11XQ9BZA7 Y_RNA.166-201ENST00000363730 102 ntBASIC0.32□□□□□ -2.36
PCDH11XQ9BZA7 Y_RNA.203-201ENST00000364106 102 ntBASIC0.32□□□□□ -2.36
PCDH11XQ9BZA7 Y_RNA.329-201ENST00000365209 107 ntBASIC0.32□□□□□ -2.36
PCDH11XQ9BZA7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms