Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 Y_RNA.336-201ENST00000365307 109 ntBASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 SNORA2.2-201ENST00000365473 135 ntBASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 HMGN2P32-201ENST00000444648 269 ntBASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 TRBV12-1-201ENST00000479785 344 ntBASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM56Q9BRZ2 SNORD115-28-201ENST00000363931 81 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 SNORA71.1-201ENST00000364523 117 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 SNORD12C-201ENST00000386307 89 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 MIR887-201ENST00000401258 79 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 AC099677.2-201ENST00000436385 175 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 RNU7-25P-201ENST00000516544 62 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 SNORA31.26-201ENST00000517250 137 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 MIR3124-201ENST00000582636 67 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 AC069114.2-201ENST00000604699 304 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 AL033523.1-201ENST00000605153 153 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 AC245060.5-201ENST00000610778 3293 ntBASIC2.9□□□□□ -1.95
TRIM56Q9BRZ2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 Y_RNA.85-201ENST00000363014 111 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 RNU6-690P-201ENST00000365242 106 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 RNU6-106P-201ENST00000384405 107 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 AC245047.3-201ENST00000429428 127 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 AC003982.1-202ENST00000469928 248 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 RNU6-240P-201ENST00000516098 97 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 SNORA72.7-201ENST00000516349 94 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 Y_RNA.677-201ENST00000516401 85 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 RNU6-537P-201ENST00000517277 103 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 AC107016.2-201ENST00000547968 190 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 MIR7106-201ENST00000612419 65 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 AL137790.1-201ENST00000634283 177 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 MIR376A2-201ENST00000636782 80 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM56Q9BRZ2 Y_RNA.49-201ENST00000362714 112 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 RNU6-268P-201ENST00000364174 107 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 Y_RNA.213-201ENST00000364178 111 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 Y_RNA.265-201ENST00000364677 108 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 RNU1-91P-201ENST00000364746 163 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 MIR759-201ENST00000390224 91 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 AL445646.1-201ENST00000431784 216 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 SNORD45.4-201ENST00000516629 73 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 AC106754.2-201ENST00000623006 233 ntBASIC2.88□□□□□ -1.95
TRIM56Q9BRZ2 Y_RNA.37-201ENST00000362606 108 ntBASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 SNORA5B-201ENST00000363786 132 ntBASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 Y_RNA.198-201ENST00000364013 98 ntBASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 U8.9-201ENST00000365667 134 ntBASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 Y_RNA.547-201ENST00000384654 119 ntBASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 MIR512-1-201ENST00000384913 84 ntBASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 RNA5SP465-201ENST00000391195 109 ntBASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 RNU6-554P-201ENST00000410466 106 ntBASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM56Q9BRZ2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 SNORA9.2-201ENST00000365361 133 ntBASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 SNORA80E-201ENST00000384744 137 ntBASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 MIR1302-5-201ENST00000408164 150 ntBASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 AC022018.1-201ENST00000430685 241 ntBASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 SNRPGP14-201ENST00000435400 219 ntBASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 AC022513.1-201ENST00000624512 117 ntBASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM56Q9BRZ2 AL589743.1-201ENST00000551932 2712 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 Z82195.2-201ENST00000612348 18351 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 RNY4P6-201ENST00000363667 96 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 RNU1-133P-201ENST00000364867 167 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 RNU6-950P-201ENST00000384651 107 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 AC087499.4-201ENST00000448505 178 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 MIR4672-201ENST00000583126 81 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 SNORA28-201ENST00000606769 126 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 MIR4679-1-201ENST00000637619 75 ntBASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM56Q9BRZ2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 RNU6-766P-201ENST00000362478 107 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 SNORD115-3-201ENST00000363100 82 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms