Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC117454.1-201ENST00000491120 168 ntBASIC1.12□□□□□ -2.23
CCDC71Q8IV32 RNY3P15-201ENST00000516297 97 ntBASIC1.12□□□□□ -2.23
CCDC71Q8IV32 AC127455.1-201ENST00000565496 145 ntBASIC1.12□□□□□ -2.23
CCDC71Q8IV32 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC71Q8IV32 MIR6734-201ENST00000621166 68 ntBASIC1.12□□□□□ -2.23
CCDC71Q8IV32 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC71Q8IV32 Y_RNA.203-201ENST00000364106 102 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 SNORA72.4-201ENST00000384174 132 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 RNU6-163P-201ENST00000384396 106 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCDC71Q8IV32 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC71Q8IV32 MTND4LP30-201ENST00000454092 297 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 RNU7-141P-201ENST00000459304 62 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 AC114811.1-201ENST00000507207 168 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 RNU6-322P-201ENST00000516010 103 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 RNU6-917P-201ENST00000516294 104 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 Y_RNA.714-201ENST00000517065 90 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.11□□□□□ -2.23
CCDC71Q8IV32 CYP3A52P-201ENST00000563326 91 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 GHRLOS.1-201ENST00000610995 70 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 MIR548AY-201ENST00000617669 107 ntBASIC1.11□□□□□ -2.23
CCDC71Q8IV32 snoU2_19.2-201ENST00000363024 80 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 RNU6-674P-201ENST00000363831 107 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 RNU6-290P-201ENST00000365212 101 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 RNU6-42P-201ENST00000384165 107 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 MTCO1P5-201ENST00000433573 344 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC71Q8IV32 AL731563.1-201ENST00000442202 214 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 AC098869.1-201ENST00000481627 292 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 RPL23AP54-201ENST00000495129 419 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 RNA5SP220-201ENST00000516298 104 ntBASIC1.1□□□□□ -2.23
CCDC71Q8IV32 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC71Q8IV32 RNU6-326P-201ENST00000365480 107 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 RNU6-969P-201ENST00000383900 105 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 SNORD41-201ENST00000386967 70 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 AL451046.2-201ENST00000403074 277 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 RNU2-14P-201ENST00000411053 191 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.09□□□□□ -2.23
CCDC71Q8IV32 PIGPP3-201ENST00000425307 415 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 SNRPGP10-201ENST00000432323 225 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 MRPS35P2-201ENST00000508242 191 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 RNU6-922P-201ENST00000516753 99 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 RN7SKP88-201ENST00000516847 250 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 RNU2-31P-201ENST00000516954 155 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 RNU6-165P-201ENST00000517170 99 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 AP003733.2-201ENST00000529409 171 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 AL442663.2-201ENST00000554385 511 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 7SK.8-201ENST00000612110 250 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 7SK.11-201ENST00000615477 250 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 MIR8065-201ENST00000620577 100 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 7SK.13-201ENST00000622040 250 ntBASIC1.09□□□□□ -2.23
CCDC71Q8IV32 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC71Q8IV32 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.26-201ENST00000362539 101 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 RNU6-899P-201ENST00000363947 107 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 RNU6-806P-201ENST00000365147 105 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.541-201ENST00000384640 113 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 MIR215-201ENST00000384858 110 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 MIR452-201ENST00000385020 85 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 SNORA53-201ENST00000391141 249 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 RNU6-131P-201ENST00000391144 107 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 SNORA26.5-201ENST00000391215 123 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 SNORA36B-201ENST00000410438 131 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 RPL21P38-201ENST00000418090 167 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 MLLT10P1-201ENST00000418346 262 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC71Q8IV32 SNORD45.4-201ENST00000516629 73 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC71Q8IV32 MIR2681-201ENST00000581814 105 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 AC087685.1-201ENST00000587507 141 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 AL512605.2-201ENST00000592972 256 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 RMST_2.1-201ENST00000617263 136 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 AC007742.2-201ENST00000618226 398 ntBASIC1.08□□□□□ -2.24
CCDC71Q8IV32 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC71Q8IV32 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC71Q8IV32 RNU6-1084P-201ENST00000362498 107 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.64-201ENST00000362845 102 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 RNU6-1048P-201ENST00000364054 107 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 SNORD50B-201ENST00000364995 70 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 snoU2-30.1-201ENST00000365012 70 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.326-201ENST00000365176 113 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 MIR526A1-201ENST00000384897 85 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 MIR1298-201ENST00000408783 112 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 DYNLT3P2-201ENST00000442517 295 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 HMGN2P32-201ENST00000444648 269 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 RNU6-437P-201ENST00000459408 95 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 AP003072.1-201ENST00000531740 145 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 AL357312.1-201ENST00000603879 298 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 AC037487.3-201ENST00000606668 112 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 AL442644.1-201ENST00000454390 3105 ntBASIC1.07□□□□□ -2.24
CCDC71Q8IV32 Y_RNA.84-201ENST00000363011 104 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 RNU6-1209P-201ENST00000363655 107 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 RNU1-93P-201ENST00000364704 169 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 RNU6-144P-201ENST00000383951 107 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 MIR520E-201ENST00000384867 87 ntBASIC1.06□□□□□ -2.24
CCDC71Q8IV32 MIR618-201ENST00000385287 98 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms