Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.432-201ENST00000384087 111 ntBASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 MIR520G-201ENST00000385064 90 ntBASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 EDDM3CP-201ENST00000415977 425 ntBASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 AC099677.2-201ENST00000436385 175 ntBASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 RPS26P45-201ENST00000471748 340 ntBASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 SNORD14A-201ENST00000606526 91 ntBASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 RNU6-199P-201ENST00000362954 107 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 RNU6-1290P-201ENST00000362957 109 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.261-201ENST00000364631 102 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.521-201ENST00000384560 114 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 SNORA75.5-201ENST00000391291 81 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 AC009238.1-201ENST00000442165 424 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 AC009237.6-201ENST00000446969 424 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 RNU6-1299P-201ENST00000516316 100 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 RNA5SP153-201ENST00000516498 76 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 MIR2681-201ENST00000581814 105 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 AC022202.1-201ENST00000613515 211 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 AP001340.1-201ENST00000624405 217 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 MIR6079-201ENST00000635807 62 ntBASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ZNF549Q6P9A3 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.71-201ENST00000362892 104 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 SNORA3A-201ENST00000364113 130 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNA5SP493-201ENST00000364115 91 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 SNORA6-201ENST00000384033 151 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU1-148P-201ENST00000384472 162 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU6-160P-201ENST00000384591 107 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU6-1154P-201ENST00000391001 104 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 SNORD37.2-201ENST00000391075 66 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU6-735P-201ENST00000410612 107 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 snoU13.26-201ENST00000459452 105 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU6-313P-201ENST00000516317 112 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU6-62P-201ENST00000516526 102 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU7-149P-201ENST00000516739 59 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU6-1234P-201ENST00000516877 103 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 RNU6-341P-201ENST00000516973 96 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 CYCSP26-201ENST00000534107 320 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 AC104984.5-201ENST00000586878 94 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 AL359075.3-201ENST00000613288 217 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 AC018630.2-201ENST00000534866 2403 ntBASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
ZNF549Q6P9A3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.127-201ENST00000363386 109 ntBASIC1.88□□□□□ -2.11
ZNF549Q6P9A3 RNA5SP205-201ENST00000364653 136 ntBASIC1.88□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.88□□□□□ -2.11
ZNF549Q6P9A3 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
ZNF549Q6P9A3 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
ZNF549Q6P9A3 snoU13.15-201ENST00000459407 104 ntBASIC1.88□□□□□ -2.11
ZNF549Q6P9A3 AL596028.1-201ENST00000326971 197 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 RNU6-862P-201ENST00000362804 105 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 SNORD116-14-201ENST00000383894 92 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 SNORD116-17-201ENST00000383929 92 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 SNORD116-15-201ENST00000384445 92 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 SNORD116-19-201ENST00000384729 92 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 SNORA79-201ENST00000408376 140 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 AL606517.2-201ENST00000442855 241 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 HMGN1P7-201ENST00000491722 313 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 RNU2-60P-201ENST00000517290 128 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 AL358944.1-201ENST00000528537 144 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 AC007751.1-201ENST00000529260 376 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 MIR4448-201ENST00000584360 86 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 AP006437.1-201ENST00000641440 3685 ntBASIC1.87□□□□□ -2.11
ZNF549Q6P9A3 SNORA1B-201ENST00000362535 133 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 SNORD72-201ENST00000390994 80 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 CST2P1-201ENST00000425770 87 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 AC245047.4-201ENST00000433189 144 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 AC008267.6-201ENST00000441664 139 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 RNU6-1211P-201ENST00000459179 105 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 OR9P1P-201ENST00000496431 281 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 AL163195.1-201ENST00000496941 348 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 MRPS17P9-201ENST00000511924 393 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 RNU1-142P-201ENST00000516682 145 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 MIR3126-201ENST00000577443 74 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 AC022217.4-201ENST00000604389 163 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 Pinc.1-201ENST00000616452 154 ntBASIC1.86□□□□□ -2.11
ZNF549Q6P9A3 AL591926.4-201ENST00000616895 298 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms