Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU2-55P-201ENST00000411146 174 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 RPL30P13-201ENST00000418873 348 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRT40Q6A162 RPS27P1-201ENST00000450552 247 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.41□□□□□ -2.02
KRT40Q6A162 RNU7-26P-201ENST00000458980 63 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 CYCSP26-201ENST00000534107 320 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 MIR3646-201ENST00000578301 84 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 MIR378D2-201ENST00000580636 98 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 MIR5694-201ENST00000581190 76 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.41□□□□□ -2.02
KRT40Q6A162 MIR6845-201ENST00000613182 61 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 AC018630.2-201ENST00000534866 2403 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
KRT40Q6A162 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.4□□□□□ -2.02
KRT40Q6A162 RNU6-862P-201ENST00000362804 105 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 Y_RNA.253-201ENST00000364562 112 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 RNA5SP160-201ENST00000364866 120 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 RNU6-597P-201ENST00000365620 102 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 RNU6-22P-201ENST00000384355 107 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 RNU6-460P-201ENST00000391158 108 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 SNORA17.3-201ENST00000391159 129 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 SNORA26.9-201ENST00000391322 122 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 AL606517.2-201ENST00000442855 241 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 AC011753.1-201ENST00000451001 220 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 AL160236.1-201ENST00000556317 195 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 MIR2681-201ENST00000581814 105 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 MIR4658-201ENST00000584344 65 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 AC097639.2-201ENST00000603159 172 ntBASIC2.4□□□□□ -2.03
KRT40Q6A162 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.4□□□□□ -2.03
KRT40Q6A162 RNU6-199P-201ENST00000362954 107 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 Y_RNA.218-201ENST00000364218 104 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 RNU6-1117P-201ENST00000384525 104 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 Y_RNA.521-201ENST00000384560 114 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 Y_RNA.542-201ENST00000384641 111 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 MIR524-201ENST00000385242 87 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 SNORD37.2-201ENST00000391075 66 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 MIR513C-201ENST00000401352 84 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.39□□□□□ -2.03
KRT40Q6A162 AL021397.1-201ENST00000451806 248 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 AC233266.1-201ENST00000454518 96 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 AL163195.1-201ENST00000496941 348 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 RNU6-1299P-201ENST00000516316 100 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 RNU7-149P-201ENST00000516739 59 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 RNU6-341P-201ENST00000516973 96 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 AC242852.1-201ENST00000612151 96 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 AC244015.1-201ENST00000622301 99 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 MIR219B-201ENST00000637023 88 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 MIR6844-201ENST00000637122 62 ntBASIC2.39□□□□□ -2.03
KRT40Q6A162 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRT40Q6A162 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRT40Q6A162 SNORD115-3-201ENST00000363100 82 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 Y_RNA.267-201ENST00000364679 109 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 Y_RNA.634-201ENST00000364811 113 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 Y_RNA.486-201ENST00000384398 107 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 SNORA8-201ENST00000384574 139 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 SNORA40-201ENST00000388090 126 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 Y_RNA.621-201ENST00000411065 96 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 CST2P1-201ENST00000425770 87 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.38□□□□□ -2.03
KRT40Q6A162 AC025033.1-201ENST00000463883 194 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 RNU1-142P-201ENST00000516682 145 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 RNU6-971P-201ENST00000516920 106 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 AL365222.1-201ENST00000614661 98 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 AL449363.1-201ENST00000617815 186 ntBASIC2.38□□□□□ -2.03
KRT40Q6A162 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.38□□□□□ -2.03
KRT40Q6A162 SNORA1B-201ENST00000362535 133 ntBASIC2.37□□□□□ -2.03
KRT40Q6A162 RNU6-1138P-201ENST00000365359 106 ntBASIC2.37□□□□□ -2.03
KRT40Q6A162 MIR489-201ENST00000384923 84 ntBASIC2.37□□□□□ -2.03
KRT40Q6A162 SNORA75.5-201ENST00000391291 81 ntBASIC2.37□□□□□ -2.03
KRT40Q6A162 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.37□□□□□ -2.03
KRT40Q6A162 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.37□□□□□ -2.03
KRT40Q6A162 BX510359.4-201ENST00000423750 193 ntBASIC2.37□□□□□ -2.03
KRT40Q6A162 RNU6-717P-201ENST00000459076 104 ntBASIC2.37□□□□□ -2.03
KRT40Q6A162 HMGN1P7-201ENST00000491722 313 ntBASIC2.37□□□□□ -2.03
KRT40Q6A162 RNA5SP153-201ENST00000516498 76 ntBASIC2.37□□□□□ -2.03
KRT40Q6A162 AC022217.4-201ENST00000604389 163 ntBASIC2.37□□□□□ -2.03
KRT40Q6A162 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.37□□□□□ -2.03
KRT40Q6A162 Y_RNA.66-201ENST00000362862 102 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 RNU6-23P-201ENST00000363283 107 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 SNORA12.1-201ENST00000390873 148 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 SNORD72-201ENST00000390994 80 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 SNRPGP10-201ENST00000432323 225 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.36□□□□□ -2.03
KRT40Q6A162 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 MRPS17P9-201ENST00000511924 393 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 IGLV3-17-201ENST00000519099 244 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 JPX_2.1-201ENST00000614161 69 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 Pinc.1-201ENST00000616452 154 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 AL591926.4-201ENST00000616895 298 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 AP000553.5-201ENST00000641933 54 ntBASIC2.36□□□□□ -2.03
KRT40Q6A162 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRT40Q6A162 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KRT40Q6A162 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
KRT40Q6A162 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KRT40Q6A162 SNORA22C-201ENST00000384614 134 ntBASIC2.35□□□□□ -2.03
KRT40Q6A162 RNA5SP323-201ENST00000391094 133 ntBASIC2.35□□□□□ -2.03
KRT40Q6A162 SNORA79-201ENST00000408376 140 ntBASIC2.35□□□□□ -2.03
KRT40Q6A162 RNA5SP338-201ENST00000410495 85 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms