Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MIR342-201ENST00000362212 99 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 U8.5-201ENST00000364528 136 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 Y_RNA.265-201ENST00000364677 108 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 SNORA26.2-201ENST00000390922 122 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 RNY4P29-201ENST00000410801 97 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 RPS29P6-201ENST00000438196 145 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 AC009238.1-201ENST00000442165 424 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 AC009237.6-201ENST00000446969 424 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 AL109933.2-201ENST00000452651 260 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 RNU7-123P-201ENST00000515911 60 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 SCARNA13-201ENST00000516672 275 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 AC141557.1-201ENST00000540982 400 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 MIR4325-201ENST00000583049 90 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 AC002984.1-201ENST00000591692 448 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 HSPE1P19-201ENST00000603327 295 ntBASIC3.4□□□□□ -1.87
RNF20Q5VTR2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RNF20Q5VTR2 Y_RNA.388-201ENST00000383919 113 ntBASIC3.39□□□□□ -1.87
RNF20Q5VTR2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF20Q5VTR2 AC245047.3-201ENST00000429428 127 ntBASIC3.39□□□□□ -1.87
RNF20Q5VTR2 snoU13.22-201ENST00000459428 104 ntBASIC3.39□□□□□ -1.87
RNF20Q5VTR2 SNORA9.3-201ENST00000516383 129 ntBASIC3.39□□□□□ -1.87
RNF20Q5VTR2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF20Q5VTR2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF20Q5VTR2 AC009487.2-201ENST00000420969 6821 ntBASIC3.39□□□□□ -1.87
RNF20Q5VTR2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF20Q5VTR2 RNA5SP493-201ENST00000364115 91 ntBASIC3.38□□□□□ -1.87
RNF20Q5VTR2 SNX2P2-201ENST00000424553 323 ntBASIC3.38□□□□□ -1.87
RNF20Q5VTR2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF20Q5VTR2 AC099677.2-201ENST00000436385 175 ntBASIC3.38□□□□□ -1.87
RNF20Q5VTR2 MIR3605-201ENST00000583214 100 ntBASIC3.38□□□□□ -1.87
RNF20Q5VTR2 MIR4305-201ENST00000583252 102 ntBASIC3.38□□□□□ -1.87
RNF20Q5VTR2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RNF20Q5VTR2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF20Q5VTR2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RNF20Q5VTR2 MIR26A1-201ENST00000362205 77 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 RNU4-16P-201ENST00000364737 141 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 Y_RNA.336-201ENST00000365307 109 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 Y_RNA.558-201ENST00000384685 113 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 RNY1P7-201ENST00000384743 110 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 MIR548D2-201ENST00000384955 97 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RNF20Q5VTR2 RNA5SP109-201ENST00000391010 116 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF20Q5VTR2 AL049873.1-201ENST00000480540 376 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 RN7SL297P-201ENST00000483161 293 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 RNU6-56P-201ENST00000516986 93 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 AC084364.2-201ENST00000546924 395 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.37□□□□□ -1.87
RNF20Q5VTR2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF20Q5VTR2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF20Q5VTR2 SNORD115-3-201ENST00000363100 82 ntBASIC3.36□□□□□ -1.87
RNF20Q5VTR2 RNA5SP482-201ENST00000391269 118 ntBASIC3.36□□□□□ -1.87
RNF20Q5VTR2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF20Q5VTR2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.36□□□□□ -1.87
RNF20Q5VTR2 RNU6-1116P-201ENST00000517269 99 ntBASIC3.36□□□□□ -1.87
RNF20Q5VTR2 MIR3616-201ENST00000584070 92 ntBASIC3.36□□□□□ -1.87
RNF20Q5VTR2 AC091932.4-201ENST00000623386 200 ntBASIC3.36□□□□□ -1.87
RNF20Q5VTR2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF20Q5VTR2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF20Q5VTR2 RNU7-80P-201ENST00000459562 61 ntBASIC3.35□□□□□ -1.87
RNF20Q5VTR2 RNU2-35P-201ENST00000516446 142 ntBASIC3.35□□□□□ -1.87
RNF20Q5VTR2 RNU6-826P-201ENST00000516827 104 ntBASIC3.35□□□□□ -1.87
RNF20Q5VTR2 ZNF861P-201ENST00000588126 639 ntBASIC3.35□□□□□ -1.87
RNF20Q5VTR2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF20Q5VTR2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RNF20Q5VTR2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF20Q5VTR2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF20Q5VTR2 RNU6-23P-201ENST00000363283 107 ntBASIC3.34□□□□□ -1.87
RNF20Q5VTR2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.34□□□□□ -1.87
RNF20Q5VTR2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF20Q5VTR2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF20Q5VTR2 STAG3L5P-204ENST00000443759 179 ntBASIC3.34□□□□□ -1.87
RNF20Q5VTR2 AC003982.1-202ENST00000469928 248 ntBASIC3.34□□□□□ -1.87
RNF20Q5VTR2 AC114811.1-201ENST00000507207 168 ntBASIC3.34□□□□□ -1.87
RNF20Q5VTR2 MIR3169-201ENST00000578032 83 ntBASIC3.34□□□□□ -1.87
RNF20Q5VTR2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF20Q5VTR2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.34□□□□□ -1.87
RNF20Q5VTR2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.34□□□□□ -1.87
RNF20Q5VTR2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.34□□□□□ -1.88
RNF20Q5VTR2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.34□□□□□ -1.88
RNF20Q5VTR2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
RNF20Q5VTR2 AL355596.1-201ENST00000565399 3996 ntBASIC3.34□□□□□ -1.88
RNF20Q5VTR2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF20Q5VTR2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF20Q5VTR2 AL139132.1-201ENST00000431587 344 ntBASIC3.33□□□□□ -1.88
RNF20Q5VTR2 AL445687.1-201ENST00000439946 251 ntBASIC3.33□□□□□ -1.88
RNF20Q5VTR2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF20Q5VTR2 AC087499.4-201ENST00000448505 178 ntBASIC3.33□□□□□ -1.88
RNF20Q5VTR2 RPL39P25-201ENST00000449384 154 ntBASIC3.33□□□□□ -1.88
RNF20Q5VTR2 S100A11P2-201ENST00000467589 312 ntBASIC3.33□□□□□ -1.88
RNF20Q5VTR2 RNU7-6P-201ENST00000516845 62 ntBASIC3.33□□□□□ -1.88
RNF20Q5VTR2 MIR3163-201ENST00000581592 73 ntBASIC3.33□□□□□ -1.88
RNF20Q5VTR2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF20Q5VTR2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF20Q5VTR2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF20Q5VTR2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF20Q5VTR2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RNF20Q5VTR2 SNORA63D-201ENST00000364359 132 ntBASIC3.32□□□□□ -1.88
RNF20Q5VTR2 RNU6-163P-201ENST00000384396 106 ntBASIC3.32□□□□□ -1.88
RNF20Q5VTR2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms