Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 Y_RNA.203-201ENST00000364106 102 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 Y_RNA.341-201ENST00000365341 102 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 Y_RNA.466-201ENST00000384294 113 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 AC024067.1-201ENST00000426199 223 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 RNU6-699P-201ENST00000517081 110 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 DEFB108E-201ENST00000524692 240 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 AC006600.1-201ENST00000572529 153 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 MIR5188-201ENST00000583467 113 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 AL136317.1-201ENST00000612653 226 ntBASIC0.66□□□□□ -2.3
LDLRAP1Q5SW96 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
LDLRAP1Q5SW96 Y_RNA.259-201ENST00000364619 101 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-708P-201ENST00000384217 107 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 SNORD63-201ENST00000384262 68 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.463-201ENST00000384271 102 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 SNORD38C-201ENST00000384381 69 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-342P-201ENST00000384521 104 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-613P-201ENST00000410412 108 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 RBMX2P4-201ENST00000441256 376 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 RNU7-115P-201ENST00000516433 55 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.718-201ENST00000517110 102 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 AC023827.1-201ENST00000569247 97 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 POLR3GP1-201ENST00000594073 261 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 MIR4251-201ENST00000635819 61 ntBASIC0.65□□□□□ -2.31
LDLRAP1Q5SW96 RNU1-115P-201ENST00000365329 160 ntBASIC0.64□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.428-201ENST00000384078 102 ntBASIC0.64□□□□□ -2.31
LDLRAP1Q5SW96 AF228730.4-201ENST00000421457 183 ntBASIC0.64□□□□□ -2.31
LDLRAP1Q5SW96 AC024405.2-202ENST00000532731 184 ntBASIC0.64□□□□□ -2.31
LDLRAP1Q5SW96 AL121655.1-201ENST00000605811 308 ntBASIC0.64□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.772-201ENST00000606692 102 ntBASIC0.64□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.70-201ENST00000362886 110 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 SNORD81.1-201ENST00000363064 77 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.142-201ENST00000363491 102 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-674P-201ENST00000363831 107 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.242-201ENST00000364473 110 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 SNORD113.3-201ENST00000364630 78 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-1335P-201ENST00000365426 107 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-442P-201ENST00000383968 104 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-1304P-201ENST00000411374 106 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 HMGN1P10-201ENST00000474557 553 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 FGF7P4-201ENST00000509595 295 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 SNORA40.14-201ENST00000516543 86 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 SNORD116.3-201ENST00000517176 78 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 AL355375.2-201ENST00000574825 175 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 MIR2681-201ENST00000581814 105 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 MIR6516-201ENST00000630554 81 ntBASIC0.63□□□□□ -2.31
LDLRAP1Q5SW96 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-1115P-201ENST00000362490 106 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.331-201ENST00000365267 102 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.384-201ENST00000383909 102 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-1067P-201ENST00000384752 107 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 MIR1827-201ENST00000408549 66 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 AC067940.1-201ENST00000458411 300 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 NDUFA4P2-201ENST00000489989 244 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.713-201ENST00000517013 96 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 MIR548AR-201ENST00000582191 57 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 AC005730.3-201ENST00000583067 366 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 JPX_2.1-201ENST00000614161 69 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 MIR548AY-201ENST00000617669 107 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 MTND4LP32-201ENST00000636111 270 ntBASIC0.62□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.168-201ENST00000363740 102 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.187-201ENST00000363918 113 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.252-201ENST00000364556 101 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 RNU1-133P-201ENST00000364867 167 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.458-201ENST00000384240 102 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.551-201ENST00000384661 102 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 AL590004.1-201ENST00000405321 300 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 AC096644.2-201ENST00000429278 159 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 MIR2115-201ENST00000516657 100 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 AC008507.4-201ENST00000585464 127 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 UBE2V2P2-201ENST00000587677 504 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 AL132765.2-201ENST00000610812 351 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 Pinc.1-201ENST00000616452 154 ntBASIC0.61□□□□□ -2.31
LDLRAP1Q5SW96 MIR377-201ENST00000362145 69 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-1209P-201ENST00000363655 107 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 U8.7-201ENST00000364940 136 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 SNORD28B-201ENST00000390993 75 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 SNORD99-201ENST00000408612 74 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 DEFB117-201ENST00000602356 141 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 AC011373.1-201ENST00000607270 237 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 AC122108.2-201ENST00000611946 526 ntBASIC0.6□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.36-201ENST00000362602 112 ntBASIC0.59□□□□□ -2.31
LDLRAP1Q5SW96 Y_RNA.39-201ENST00000362620 98 ntBASIC0.59□□□□□ -2.31
LDLRAP1Q5SW96 RNU6-268P-201ENST00000364174 107 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms