Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 Y_RNA.5-201ENST00000362334 102 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 Y_RNA.148-201ENST00000363557 117 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 RNU6-1209P-201ENST00000363655 107 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 Y_RNA.263-201ENST00000364659 114 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 RNU6-442P-201ENST00000383968 104 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 RNU6-937P-201ENST00000384325 106 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 MIR1287-201ENST00000408492 90 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 U8.20-201ENST00000459445 131 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 HMGN1P10-201ENST00000474557 553 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.67□□□□□ -2.3
RAB40BQ12829 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.67□□□□□ -2.3
RAB40BQ12829 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 SNORD58B-201ENST00000607313 66 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.67□□□□□ -2.3
RAB40BQ12829 MIR4251-201ENST00000635819 61 ntBASIC0.67□□□□□ -2.3
RAB40BQ12829 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RAB40BQ12829 Y_RNA.80-201ENST00000362996 102 ntBASIC0.66□□□□□ -2.3
RAB40BQ12829 Y_RNA.143-201ENST00000363520 106 ntBASIC0.66□□□□□ -2.3
RAB40BQ12829 SNORD63-201ENST00000384262 68 ntBASIC0.66□□□□□ -2.3
RAB40BQ12829 Y_RNA.485-201ENST00000384395 102 ntBASIC0.66□□□□□ -2.3
RAB40BQ12829 RNA5SP247-201ENST00000411181 105 ntBASIC0.66□□□□□ -2.3
RAB40BQ12829 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
RAB40BQ12829 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.66□□□□□ -2.3
RAB40BQ12829 AL080274.1-201ENST00000605565 220 ntBASIC0.66□□□□□ -2.3
RAB40BQ12829 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
RAB40BQ12829 MIR6767-201ENST00000637302 66 ntBASIC0.66□□□□□ -2.3
RAB40BQ12829 Y_RNA.58-201ENST00000362807 102 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 Y_RNA.154-201ENST00000363624 102 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 Y_RNA.796-201ENST00000364268 102 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 RNU4-50P-201ENST00000364361 141 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 Y_RNA.799-201ENST00000364992 102 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 RNY3P1-201ENST00000365085 102 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 RNY3-201ENST00000365484 102 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 Y_RNA.471-201ENST00000384312 102 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 MIR520E-201ENST00000384867 87 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 SNORD89-201ENST00000390981 114 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 AL035398.1-201ENST00000430869 322 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 POLR2KP2-201ENST00000438155 177 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 RNU6-507P-201ENST00000516045 100 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 RNU11-2P-201ENST00000516898 142 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 MIR4698-201ENST00000577795 80 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.65□□□□□ -2.31
RAB40BQ12829 MIR548AR-201ENST00000582191 57 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 RNU6-94P-201ENST00000607728 107 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 AC006157.1-201ENST00000611750 366 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.65□□□□□ -2.31
RAB40BQ12829 AC112487.2-201ENST00000637950 304 ntBASIC0.65□□□□□ -2.31
RAB40BQ12829 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.65□□□□□ -2.31
RAB40BQ12829 AL442644.1-201ENST00000454390 3105 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 MIR373-201ENST00000362273 69 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 Y_RNA.383-201ENST00000383855 97 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 SNORD28B-201ENST00000390993 75 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 RNU6-994P-201ENST00000410507 111 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.64□□□□□ -2.31
RAB40BQ12829 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 MTND5P20-201ENST00000448677 143 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 AC067940.1-201ENST00000458411 300 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 RNU6-437P-201ENST00000459408 95 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 NDUFA4P2-201ENST00000489989 244 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 AC040926.1-201ENST00000530195 238 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 MIR2681-201ENST00000581814 105 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 AC104465.1-201ENST00000611365 139 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 7SK.10-201ENST00000621414 298 ntBASIC0.64□□□□□ -2.31
RAB40BQ12829 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
RAB40BQ12829 RNU4-80P-201ENST00000363200 141 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 Y_RNA.224-201ENST00000364308 111 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 Y_RNA.315-201ENST00000365117 102 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 RNY1P14-201ENST00000384426 108 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 SNORA36B-201ENST00000410438 131 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 AC005534.2-201ENST00000431047 433 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 RNU7-141P-201ENST00000459304 62 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.63□□□□□ -2.31
RAB40BQ12829 Y_RNA.702-201ENST00000516843 96 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 AC036111.3-201ENST00000526389 112 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 MIR548S-201ENST00000581352 82 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 AC008507.4-201ENST00000585464 127 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 Pinc.1-201ENST00000616452 154 ntBASIC0.63□□□□□ -2.31
RAB40BQ12829 RNU6-1048P-201ENST00000364054 107 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 RNU6-268P-201ENST00000364174 107 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 Y_RNA.370-201ENST00000365589 108 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 Y_RNA.579-201ENST00000390939 94 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 RNU6-1248P-201ENST00000391096 64 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 SNORD111-201ENST00000408139 94 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 MIR1278-201ENST00000408753 81 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 SNRPGP14-201ENST00000435400 219 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.62□□□□□ -2.31
RAB40BQ12829 AL392103.1-201ENST00000447000 198 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms