Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.37□□□□□ -2.47
ABCA4P78363 AP000676.1-201ENST00000533307 52 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 AL157687.1-201ENST00000554853 619 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 MIR5583-1-201ENST00000580941 59 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 PIGPP4-201ENST00000584447 307 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 RNU6-86P-201ENST00000606534 107 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 AC137590.2-201ENST00000619709 240 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.37□□□□□ -2.47
ABCA4P78363 MTND5P18-201ENST00000445624 1801 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
ABCA4P78363 RNU6-227P-201ENST00000362865 103 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 RNU6-179P-201ENST00000363350 107 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 RNY1P2-201ENST00000364820 117 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 SNORD116-9-201ENST00000384000 95 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 SNORD116-3-201ENST00000384287 95 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 SNORD116-8-201ENST00000384365 95 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 RNU6-434P-201ENST00000384376 107 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 SNORD116-7-201ENST00000384404 95 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 SNORD116-5-201ENST00000384462 95 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 MT-TF-201ENST00000387314 71 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AL139396.1-201ENST00000421137 167 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 MTCO1P20-201ENST00000425366 358 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.38□□□□□ -2.47
ABCA4P78363 AC069271.1-201ENST00000445577 156 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AC244505.6-201ENST00000452829 130 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.38□□□□□ -2.47
ABCA4P78363 RNU6-437P-201ENST00000459408 95 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.38□□□□□ -2.47
ABCA4P78363 MIR548AE1-201ENST00000583292 70 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AC138207.3-201ENST00000585289 166 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AP001282.2-201ENST00000616149 309 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AL078596.1-201ENST00000624856 447 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 RNU4-16P-201ENST00000364737 141 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 RNU6-119P-201ENST00000364882 107 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
ABCA4P78363 MTCYBP4-201ENST00000401524 249 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 MTATP6P26-201ENST00000445926 662 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 MTND4P19-201ENST00000446659 478 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AP003181.2-201ENST00000528941 181 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AL442663.2-201ENST00000554385 511 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AC005972.2-201ENST00000604690 348 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AL158209.2-201ENST00000619266 216 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 AC023510.2-201ENST00000622162 746 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 Z97988.1-201ENST00000637697 135 ntBASIC-0.38□□□□□ -2.47
ABCA4P78363 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.38□□□□□ -2.47
ABCA4P78363 MIR30D-201ENST00000362283 70 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU6-865P-201ENST00000364772 107 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AL590002.1-201ENST00000406554 418 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU6-325P-201ENST00000411132 105 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AL365203.2-201ENST00000423444 196 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 SNORA13-201ENST00000458790 133 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AC116353.2-201ENST00000505332 712 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 SNORD38.3-201ENST00000516599 73 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 snoU83B.1-201ENST00000517136 88 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.39□□□□□ -2.47
ABCA4P78363 HULC.1-201ENST00000612720 240 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AL391262.2-201ENST00000622466 494 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNY1P12-201ENST00000364251 105 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 SNORA72-201ENST00000384339 132 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNA5SP475-201ENST00000410568 110 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 MTATP6P20-201ENST00000414147 562 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.39□□□□□ -2.47
ABCA4P78363 AL365184.2-201ENST00000431139 435 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 MTND3P23-201ENST00000431980 347 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 POLR2KP2-201ENST00000438155 177 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 USP9YP12-201ENST00000450481 570 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 SNORD65B-201ENST00000459126 73 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU7-66P-201ENST00000459469 62 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AC010424.1-201ENST00000506336 297 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 RNU6-175P-201ENST00000516896 107 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 MIR4491-201ENST00000581087 68 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AC064836.2-201ENST00000609491 462 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AL121757.2-201ENST00000611223 313 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AC008873.1-201ENST00000625051 138 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AL669831.3-213ENST00000636676 183 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 AC093726.3-201ENST00000637588 150 ntBASIC-0.39□□□□□ -2.47
ABCA4P78363 SNORA72.3-201ENST00000365074 132 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms