Protein–RNA interactions for Protein: P68543

UBXN2A, UBX domain-containing protein 2A, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2AP68543 POLR2KP2-201ENST00000438155 177 ntBASIC1.29□□□□□ -2.2
UBXN2AP68543 U8.19-201ENST00000459095 133 ntBASIC1.29□□□□□ -2.2
UBXN2AP68543 AL133373.1-201ENST00000497098 94 ntBASIC1.29□□□□□ -2.2
UBXN2AP68543 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
UBXN2AP68543 RNU6-988P-201ENST00000519081 107 ntBASIC1.29□□□□□ -2.2
UBXN2AP68543 MIR4300-201ENST00000581016 96 ntBASIC1.29□□□□□ -2.2
UBXN2AP68543 AC211469.2-201ENST00000605461 205 ntBASIC1.29□□□□□ -2.2
UBXN2AP68543 MIR376A1-201ENST00000616574 68 ntBASIC1.29□□□□□ -2.2
UBXN2AP68543 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.29□□□□□ -2.2
UBXN2AP68543 RNU6-797P-201ENST00000363101 109 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 Y_RNA.128-201ENST00000363391 112 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 SNORD113-8-201ENST00000363497 74 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 U8.5-201ENST00000364528 136 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 RNU6-102P-201ENST00000384485 104 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 MIR522-201ENST00000385071 87 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 RNU6-101P-201ENST00000410323 104 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 Y_RNA.602-201ENST00000410535 92 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 AC024067.1-201ENST00000426199 223 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 HMGN1P10-201ENST00000474557 553 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 AC117454.1-201ENST00000491120 168 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 SEPT14P8-201ENST00000508026 178 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 RNU6-897P-201ENST00000517135 105 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 MIR4762-201ENST00000585261 75 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 POLR3GP1-201ENST00000594073 261 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 SNORD113-5-201ENST00000607261 78 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 AC134503.1-201ENST00000633048 54 ntBASIC1.28□□□□□ -2.2
UBXN2AP68543 RNU6-1323P-201ENST00000384025 107 ntBASIC1.27□□□□□ -2.21
UBXN2AP68543 SNORA25-201ENST00000384384 134 ntBASIC1.27□□□□□ -2.21
UBXN2AP68543 MIR548P-201ENST00000408336 84 ntBASIC1.27□□□□□ -2.21
UBXN2AP68543 Y_RNA.711-201ENST00000516993 102 ntBASIC1.27□□□□□ -2.21
UBXN2AP68543 AC024405.2-202ENST00000532731 184 ntBASIC1.27□□□□□ -2.21
UBXN2AP68543 RNU6-1048P-201ENST00000364054 107 ntBASIC1.26□□□□□ -2.21
UBXN2AP68543 U8.7-201ENST00000364940 136 ntBASIC1.26□□□□□ -2.21
UBXN2AP68543 SNORA63.7-201ENST00000365579 123 ntBASIC1.26□□□□□ -2.21
UBXN2AP68543 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
UBXN2AP68543 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
UBXN2AP68543 SNORA31.4-201ENST00000516049 129 ntBASIC1.26□□□□□ -2.21
UBXN2AP68543 SNORD116-28-201ENST00000516123 91 ntBASIC1.26□□□□□ -2.21
UBXN2AP68543 AP003357.1-201ENST00000604497 148 ntBASIC1.26□□□□□ -2.21
UBXN2AP68543 AL022345.2-201ENST00000606307 135 ntBASIC1.26□□□□□ -2.21
UBXN2AP68543 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.26□□□□□ -2.21
UBXN2AP68543 Y_RNA.105-201ENST00000363182 111 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 Y_RNA.183-201ENST00000363882 113 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 MIR516B2-201ENST00000385190 85 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 MIR1298-201ENST00000408783 112 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 MIR1252-201ENST00000408861 65 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 RNU2-14P-201ENST00000411053 191 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 SNRPGP10-201ENST00000432323 225 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 HSPE1P25-201ENST00000455484 251 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 AC048334.1-201ENST00000477975 159 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 RPL23AP54-201ENST00000495129 419 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 SNORA31.2-201ENST00000516019 134 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 RNU7-116P-201ENST00000516940 62 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 MIR3171-201ENST00000584270 74 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 MIR548AY-201ENST00000617669 107 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 AC027335.2-201ENST00000624030 375 ntBASIC1.25□□□□□ -2.21
UBXN2AP68543 RNU6-1084P-201ENST00000362498 107 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 RNU1-133P-201ENST00000364867 167 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 Y_RNA.418-201ENST00000384029 102 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 Y_RNA.527-201ENST00000384573 102 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
UBXN2AP68543 RNU6-131P-201ENST00000391144 107 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 RNU6-121P-201ENST00000410525 99 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 RPL39P39-201ENST00000455840 151 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 OR2A41P-201ENST00000473586 105 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 RNU7-115P-201ENST00000516433 55 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 SNORD45.4-201ENST00000516629 73 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 SNORA70.22-201ENST00000517160 124 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 AC020661.2-201ENST00000560114 134 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 AC127455.1-201ENST00000565496 145 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 BX284668.6-201ENST00000606899 438 ntBASIC1.24□□□□□ -2.21
UBXN2AP68543 RNU1-124P-201ENST00000363861 145 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 Y_RNA.222-201ENST00000364264 102 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 SNORD50B-201ENST00000364995 70 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 Y_RNA.336-201ENST00000365307 109 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 MIR452-201ENST00000385020 85 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 SNORD115-46-201ENST00000390982 71 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.23□□□□□ -2.21
UBXN2AP68543 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 AC245047.7-201ENST00000440265 293 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 RNU7-141P-201ENST00000459304 62 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 RNU6-496P-201ENST00000516145 99 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 SNORD111.1-201ENST00000516421 86 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 Y_RNA.721-201ENST00000517207 102 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 HSPE1P19-201ENST00000603327 295 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 AL020996.3-201ENST00000606617 222 ntBASIC1.23□□□□□ -2.21
UBXN2AP68543 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.23□□□□□ -2.21
UBXN2AP68543 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UBXN2AP68543 RNU6-801P-201ENST00000364087 105 ntBASIC1.22□□□□□ -2.21
UBXN2AP68543 Y_RNA.203-201ENST00000364106 102 ntBASIC1.22□□□□□ -2.21
UBXN2AP68543 RNU6-1132P-201ENST00000459214 107 ntBASIC1.22□□□□□ -2.21
UBXN2AP68543 SNORD114-21-201ENST00000606412 72 ntBASIC1.22□□□□□ -2.21
UBXN2AP68543 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
UBXN2AP68543 AC134026.1-201ENST00000623249 2239 ntBASIC1.21□□□□□ -2.21
UBXN2AP68543 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
UBXN2AP68543 snoU2-30.1-201ENST00000365012 70 ntBASIC1.21□□□□□ -2.22
UBXN2AP68543 SNORA72.4-201ENST00000384174 132 ntBASIC1.21□□□□□ -2.22
UBXN2AP68543 RNU6-910P-201ENST00000390844 107 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms