Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 MIR3126-201ENST00000577443 74 ntBASIC2.53□□□□□ -2
SLC6A11P48066 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SLC6A11P48066 RNU6-508P-201ENST00000363231 103 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 MIR504-201ENST00000385065 83 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 MIR522-201ENST00000385071 87 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 MIR624-201ENST00000385217 97 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 AC245047.3-201ENST00000429428 127 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 RNU6-693P-201ENST00000516134 107 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 RNU6-919P-201ENST00000516731 104 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 RNU2-60P-201ENST00000517290 128 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 AC087685.1-201ENST00000587507 141 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 AC046143.2-201ENST00000609789 160 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 AP006437.1-201ENST00000641440 3685 ntBASIC2.52□□□□□ -2.01
SLC6A11P48066 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SLC6A11P48066 RNU6-1084P-201ENST00000362498 107 ntBASIC2.51□□□□□ -2.01
SLC6A11P48066 AL603914.1-201ENST00000401964 204 ntBASIC2.51□□□□□ -2.01
SLC6A11P48066 AL158147.1-201ENST00000443970 75 ntBASIC2.51□□□□□ -2.01
SLC6A11P48066 CYCSP26-201ENST00000534107 320 ntBASIC2.51□□□□□ -2.01
SLC6A11P48066 MTND5P34-201ENST00000568888 325 ntBASIC2.51□□□□□ -2.01
SLC6A11P48066 MIR4524B-201ENST00000581569 115 ntBASIC2.51□□□□□ -2.01
SLC6A11P48066 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.51□□□□□ -2.01
SLC6A11P48066 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC6A11P48066 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC6A11P48066 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SLC6A11P48066 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
SLC6A11P48066 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SLC6A11P48066 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SLC6A11P48066 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SLC6A11P48066 Y_RNA.242-201ENST00000364473 110 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 RNU6-309P-201ENST00000364573 106 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 Y_RNA.265-201ENST00000364677 108 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 RNA5SP109-201ENST00000391010 116 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 RNU6-1064P-201ENST00000410626 104 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 BX510359.4-201ENST00000423750 193 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 FTH1P12-201ENST00000432137 551 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 SNRPGP13-201ENST00000442212 177 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 AL606517.2-201ENST00000442855 241 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 snoU13.26-201ENST00000459452 105 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 Y_RNA.712-201ENST00000517011 92 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 MIR3121-201ENST00000579680 77 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
SLC6A11P48066 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SLC6A11P48066 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SLC6A11P48066 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.5□□□□□ -2.01
SLC6A11P48066 RNU1-58P-201ENST00000362413 163 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 RNU6-888P-201ENST00000363010 101 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 RNA5SP456-201ENST00000364002 114 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 SNORD14E-201ENST00000364009 85 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 SNORD24-201ENST00000383884 75 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 MIR891A-201ENST00000401237 79 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.49□□□□□ -2.01
SLC6A11P48066 AC234781.5-201ENST00000508429 271 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.49□□□□□ -2.01
SLC6A11P48066 AL022345.2-201ENST00000606307 135 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.49□□□□□ -2.01
SLC6A11P48066 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.49□□□□□ -2.01
SLC6A11P48066 MTND5P32-201ENST00000560711 1802 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 RNU6-834P-201ENST00000362367 110 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 VTRNA1-1-201ENST00000363120 99 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 Y_RNA.563-201ENST00000384707 108 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 RNU6-476P-201ENST00000384726 107 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 MIR29C-201ENST00000385231 88 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 SNORA40.5-201ENST00000391061 128 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC6A11P48066 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.48□□□□□ -2.01
SLC6A11P48066 MTATP6P21-201ENST00000440681 189 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 RNA5SP281-201ENST00000516504 135 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 MIR4769-201ENST00000584126 77 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 AC069114.2-201ENST00000604699 304 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 MIR6129-201ENST00000616087 109 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 AC022513.1-201ENST00000624512 117 ntBASIC2.48□□□□□ -2.01
SLC6A11P48066 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SLC6A11P48066 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC6A11P48066 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.48□□□□□ -2.01
SLC6A11P48066 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.47□□□□□ -2.01
SLC6A11P48066 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SLC6A11P48066 RNU6-647P-201ENST00000364243 107 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 snoU2-30.1-201ENST00000365012 70 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 RNU6-442P-201ENST00000383968 104 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 RNU1-148P-201ENST00000384472 162 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 MIR597-201ENST00000384968 97 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 AC007064.1-201ENST00000412238 351 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC6A11P48066 AF228730.3-201ENST00000436691 102 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 STAG3L5P-204ENST00000443759 179 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 RNU6-826P-201ENST00000516827 104 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 AC005786.1-201ENST00000588553 154 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 MIR3914-2-201ENST00000637339 95 ntBASIC2.47□□□□□ -2.01
SLC6A11P48066 Y_RNA.280-201ENST00000364765 112 ntBASIC2.46□□□□□ -2.02
SLC6A11P48066 MIR548A2-201ENST00000384956 97 ntBASIC2.46□□□□□ -2.02
SLC6A11P48066 MIR518F-201ENST00000384973 87 ntBASIC2.46□□□□□ -2.02
SLC6A11P48066 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
SLC6A11P48066 MIR548O-201ENST00000408583 114 ntBASIC2.46□□□□□ -2.02
SLC6A11P48066 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
SLC6A11P48066 RN7SKP223-201ENST00000410582 62 ntBASIC2.46□□□□□ -2.02
SLC6A11P48066 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 246.9 ms