Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RMST_2.1-201ENST00000617263 136 ntBASIC1.04□□□□□ -2.24
PTPN4P29074 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PTPN4P29074 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
PTPN4P29074 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.04□□□□□ -2.24
PTPN4P29074 Y_RNA.216-201ENST00000364205 93 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 Y_RNA.222-201ENST00000364264 102 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 RNU6-163P-201ENST00000384396 106 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 MIR526A1-201ENST00000384897 85 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 MIR522-201ENST00000385071 87 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 PIGPP3-201ENST00000425307 415 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 POLR2KP2-201ENST00000438155 177 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 RPS23P4-201ENST00000487908 423 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 RNU7-116P-201ENST00000516940 62 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 AC020661.2-201ENST00000560114 134 ntBASIC1.03□□□□□ -2.24
PTPN4P29074 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
PTPN4P29074 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.03□□□□□ -2.24
PTPN4P29074 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.03□□□□□ -2.24
PTPN4P29074 RNU4-80P-201ENST00000363200 141 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 SNORD113-8-201ENST00000363497 74 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 RNU6-102P-201ENST00000384485 104 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 SNORD115-46-201ENST00000390982 71 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 AC104332.1-201ENST00000440471 797 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 AC114811.1-201ENST00000507207 168 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 RNU6-496P-201ENST00000516145 99 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 POLR3GP1-201ENST00000594073 261 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PTPN4P29074 AP003357.1-201ENST00000604497 148 ntBASIC1.02□□□□□ -2.25
PTPN4P29074 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.02□□□□□ -2.25
PTPN4P29074 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
PTPN4P29074 Y_RNA.105-201ENST00000363182 111 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 Y_RNA.158-201ENST00000363651 101 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 U8.7-201ENST00000364940 136 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 Y_RNA.380-201ENST00000365663 111 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 Y_RNA.418-201ENST00000384029 102 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 MIR452-201ENST00000385020 85 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 HSPE1P25-201ENST00000455484 251 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 LINC01399-202ENST00000458450 244 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 RPS29P1-201ENST00000465274 159 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 RNU7-115P-201ENST00000516433 55 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 RNU6-113P-201ENST00000516653 101 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 Y_RNA.714-201ENST00000517065 90 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 AC024405.2-202ENST00000532731 184 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 AC127455.1-201ENST00000565496 145 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.01□□□□□ -2.25
PTPN4P29074 MIR548AY-201ENST00000617669 107 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 MIR6767-201ENST00000637302 66 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 AL391516.1-201ENST00000554380 2449 ntBASIC1.01□□□□□ -2.25
PTPN4P29074 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.01□□□□□ -2.25
PTPN4P29074 AC117470.1-201ENST00000381974 330 ntBASIC1□□□□□ -2.25
PTPN4P29074 Y_RNA.455-201ENST00000384230 98 ntBASIC1□□□□□ -2.25
PTPN4P29074 MIR15B-201ENST00000385045 98 ntBASIC1□□□□□ -2.25
PTPN4P29074 RNU6-121P-201ENST00000410525 99 ntBASIC1□□□□□ -2.25
PTPN4P29074 Y_RNA.602-201ENST00000410535 92 ntBASIC1□□□□□ -2.25
PTPN4P29074 AC117454.1-201ENST00000491120 168 ntBASIC1□□□□□ -2.25
PTPN4P29074 SNORA31.2-201ENST00000516019 134 ntBASIC1□□□□□ -2.25
PTPN4P29074 Y_RNA.701-201ENST00000516812 110 ntBASIC1□□□□□ -2.25
PTPN4P29074 AC136628.3-201ENST00000521868 290 ntBASIC1□□□□□ -2.25
PTPN4P29074 Y_RNA.136-201ENST00000363444 102 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 RNU6-1048P-201ENST00000364054 107 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 RNU6-801P-201ENST00000364087 105 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 Y_RNA.203-201ENST00000364106 102 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 Y_RNA.527-201ENST00000384573 102 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 Y_RNA.581-201ENST00000391017 97 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 RNU2-14P-201ENST00000411053 191 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 MLLT10P1-201ENST00000418346 262 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 SNRPGP10-201ENST00000432323 225 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 AC245047.7-201ENST00000440265 293 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 MTCYBP6-201ENST00000441810 138 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 RPL23AP54-201ENST00000495129 419 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 RNU6-191P-201ENST00000516295 94 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 SNORD45.4-201ENST00000516629 73 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 AC113195.1-201ENST00000579952 141 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 MIR4680-201ENST00000580906 66 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 AL355297.3-201ENST00000604082 446 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
PTPN4P29074 RNU4-90P-201ENST00000362773 141 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 Y_RNA.336-201ENST00000365307 109 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 RNU6-969P-201ENST00000383900 105 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 SNORA72.4-201ENST00000384174 132 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
PTPN4P29074 RNU6-1248P-201ENST00000391096 64 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 RNU6-131P-201ENST00000391144 107 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 MIR1298-201ENST00000408783 112 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 ELOCP20-201ENST00000422460 345 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 AC131281.1-201ENST00000522984 164 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
PTPN4P29074 AL356055.1-201ENST00000602528 446 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 MIR6788-201ENST00000618842 66 ntBASIC0.98□□□□□ -2.25
PTPN4P29074 RNU6-1084P-201ENST00000362498 107 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 Y_RNA.202-201ENST00000364083 110 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 Y_RNA.214-201ENST00000364201 112 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 Y_RNA.276-201ENST00000364732 109 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 SNORD50B-201ENST00000364995 70 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 SNORA80D-201ENST00000384488 135 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 SNORA26.5-201ENST00000391215 123 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 RNU7-141P-201ENST00000459304 62 ntBASIC0.97□□□□□ -2.25
PTPN4P29074 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms