Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.36□□□□□ -2.03
VAMP1P23763 AC005908.1-201ENST00000468701 347 ntBASIC2.36□□□□□ -2.03
VAMP1P23763 AC079140.2-201ENST00000506193 142 ntBASIC2.36□□□□□ -2.03
VAMP1P23763 RNU6-255P-201ENST00000516957 105 ntBASIC2.36□□□□□ -2.03
VAMP1P23763 MTND5P41-201ENST00000517498 206 ntBASIC2.36□□□□□ -2.03
VAMP1P23763 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.36□□□□□ -2.03
VAMP1P23763 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.36□□□□□ -2.03
VAMP1P23763 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.36□□□□□ -2.03
VAMP1P23763 SNORA77B-201ENST00000578179 125 ntBASIC2.36□□□□□ -2.03
VAMP1P23763 AL035425.3-201ENST00000564206 4996 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.35□□□□□ -2.03
VAMP1P23763 Y_RNA.37-201ENST00000362606 108 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 SNORD18B-201ENST00000365659 72 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 DEFA7P-201ENST00000382676 285 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 Y_RNA.400-201ENST00000383963 111 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 SNORA1-201ENST00000384107 130 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 Y_RNA.488-201ENST00000384403 102 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 MIR490-201ENST00000384865 128 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 MIR526A1-201ENST00000384897 85 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 RNU6-588P-201ENST00000410281 105 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 CYCSP49-201ENST00000420810 319 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 RNU6-830P-201ENST00000516353 107 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 AC019176.1-201ENST00000518519 225 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 AC090049.2-201ENST00000550377 109 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 AC034105.4-201ENST00000568304 277 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 AL365205.2-201ENST00000594586 68 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 SCARNA4.1-201ENST00000628597 123 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
VAMP1P23763 MIR26A1-201ENST00000362205 77 ntBASIC2.34□□□□□ -2.03
VAMP1P23763 SNORA67.3-201ENST00000384366 140 ntBASIC2.34□□□□□ -2.03
VAMP1P23763 SNX2P2-201ENST00000424553 323 ntBASIC2.34□□□□□ -2.03
VAMP1P23763 SNORA84-201ENST00000459229 133 ntBASIC2.34□□□□□ -2.03
VAMP1P23763 AC092991.1-201ENST00000477176 376 ntBASIC2.34□□□□□ -2.03
VAMP1P23763 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.34□□□□□ -2.03
VAMP1P23763 SNORA25.12-201ENST00000516202 82 ntBASIC2.34□□□□□ -2.03
VAMP1P23763 RNU6-922P-201ENST00000516753 99 ntBASIC2.34□□□□□ -2.03
VAMP1P23763 RNU7-181P-201ENST00000517234 74 ntBASIC2.34□□□□□ -2.03
VAMP1P23763 AP003484.1-201ENST00000530974 250 ntBASIC2.34□□□□□ -2.03
VAMP1P23763 AC096644.4-201ENST00000563417 2912 ntBASIC2.34□□□□□ -2.04
VAMP1P23763 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
VAMP1P23763 MIR134-201ENST00000385258 73 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 RNU4-47P-201ENST00000410876 114 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 Z92545.1-201ENST00000411782 234 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.33□□□□□ -2.04
VAMP1P23763 AF228730.3-201ENST00000436691 102 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 RNU7-200P-201ENST00000516105 62 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 SCARNA13-201ENST00000516672 275 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 AC026403.1-201ENST00000518938 295 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 AC015688.6-201ENST00000577737 104 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 MIR548X2-201ENST00000579776 100 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 MIR3158-1-201ENST00000583596 81 ntBASIC2.33□□□□□ -2.04
VAMP1P23763 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.33□□□□□ -2.04
VAMP1P23763 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.33□□□□□ -2.04
VAMP1P23763 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VAMP1P23763 RNA5SP72-201ENST00000364442 117 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 Y_RNA.370-201ENST00000365589 108 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 RNU6-1292P-201ENST00000383856 107 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 MIR548A2-201ENST00000384956 97 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 COTL1P1-201ENST00000422309 375 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 SNORD123-201ENST00000459473 70 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 AC008834.1-201ENST00000511612 175 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 RNU6-917P-201ENST00000516294 104 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 Y_RNA.703-201ENST00000516846 111 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.32□□□□□ -2.04
VAMP1P23763 AL357312.1-201ENST00000603879 298 ntBASIC2.32□□□□□ -2.04
VAMP1P23763 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
VAMP1P23763 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VAMP1P23763 MIR6073-201ENST00000352083 89 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 RNU6-774P-201ENST00000363238 107 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 Y_RNA.215-201ENST00000364204 112 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 RNU6-1336P-201ENST00000383886 109 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 SNORA70.7-201ENST00000384159 133 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 Y_RNA.584-201ENST00000391090 114 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 RNA5SP181-201ENST00000410246 98 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.31□□□□□ -2.04
VAMP1P23763 SNORA67.7-201ENST00000516664 135 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 SNORD53-201ENST00000579969 78 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 AL513534.2-201ENST00000603836 250 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 AL365434.2-201ENST00000607979 234 ntBASIC2.31□□□□□ -2.04
VAMP1P23763 SNORA71.1-201ENST00000364523 117 ntBASIC2.3□□□□□ -2.04
VAMP1P23763 RNU6-1082P-201ENST00000364574 107 ntBASIC2.3□□□□□ -2.04
VAMP1P23763 MIR520C-201ENST00000385005 87 ntBASIC2.3□□□□□ -2.04
VAMP1P23763 MIR624-201ENST00000385217 97 ntBASIC2.3□□□□□ -2.04
VAMP1P23763 AL603908.1-201ENST00000406098 201 ntBASIC2.3□□□□□ -2.04
VAMP1P23763 RPL39P39-201ENST00000455840 151 ntBASIC2.3□□□□□ -2.04
VAMP1P23763 RNU6-947P-201ENST00000516264 106 ntBASIC2.3□□□□□ -2.04
VAMP1P23763 SNORA74.3-201ENST00000517108 154 ntBASIC2.3□□□□□ -2.04
VAMP1P23763 AL161722.3-201ENST00000605789 2983 ntBASIC2.29□□□□□ -2.04
VAMP1P23763 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
VAMP1P23763 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VAMP1P23763 MIR342-201ENST00000362212 99 ntBASIC2.29□□□□□ -2.04
VAMP1P23763 RNU6-746P-201ENST00000384112 109 ntBASIC2.29□□□□□ -2.04
VAMP1P23763 SNORA54-201ENST00000384281 123 ntBASIC2.29□□□□□ -2.04
VAMP1P23763 Y_RNA.506-201ENST00000384494 102 ntBASIC2.29□□□□□ -2.04
VAMP1P23763 SNORD77.3-201ENST00000391113 65 ntBASIC2.29□□□□□ -2.04
VAMP1P23763 AL359511.1-201ENST00000402970 211 ntBASIC2.29□□□□□ -2.04
VAMP1P23763 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms