Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL445984.1-201ENST00000637834 659 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 MTND5P18-201ENST00000445624 1801 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 SNORD24-201ENST00000383884 75 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 MIR9-2-201ENST00000384838 87 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 RNU6-298P-201ENST00000390888 96 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 AL137792.2-201ENST00000443484 235 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 AC021146.6-201ENST00000514659 117 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 MTND1P35-201ENST00000526739 508 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 DEFB131E-201ENST00000532329 154 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 ELOCP32-201ENST00000548625 324 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.83□□□□□ -2.54
SPTA1P02549 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.83□□□□□ -2.54
SPTA1P02549 AC078880.5-201ENST00000617845 421 ntBASIC-0.83□□□□□ -2.54
SPTA1P02549 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 RNU6-767P-201ENST00000384132 107 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 SNORD70.1-201ENST00000391007 85 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 SNORA25.14-201ENST00000516481 132 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 RNA5SP33-201ENST00000516687 98 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 RNU6-612P-201ENST00000516909 102 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 snoU83B.1-201ENST00000517136 88 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 AC069113.1-201ENST00000517763 267 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 AC138749.4-201ENST00000563970 127 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 MIR30D-201ENST00000362283 70 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 RNU6-442P-201ENST00000383968 104 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 SNORD115.1-201ENST00000391109 76 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 RNU6-131P-201ENST00000391144 107 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 RNU6-721P-201ENST00000410155 105 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 MRPS10P1-201ENST00000448483 130 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 RNU6-983P-201ENST00000516004 103 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 SNORD38.3-201ENST00000516599 73 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 PIGPP4-201ENST00000584447 307 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 RNU6-85P-201ENST00000605989 107 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 MIR8066-201ENST00000617280 78 ntBASIC-0.84□□□□□ -2.54
SPTA1P02549 RNU6-403P-201ENST00000363163 104 ntBASIC-0.85□□□□□ -2.54
SPTA1P02549 RNU6-865P-201ENST00000364772 107 ntBASIC-0.85□□□□□ -2.54
SPTA1P02549 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.85□□□□□ -2.54
SPTA1P02549 RNU6-136P-201ENST00000384663 107 ntBASIC-0.85□□□□□ -2.54
SPTA1P02549 USP9YP16-201ENST00000430287 407 ntBASIC-0.85□□□□□ -2.54
SPTA1P02549 AC244505.6-201ENST00000452829 130 ntBASIC-0.85□□□□□ -2.54
SPTA1P02549 RNU7-55P-201ENST00000459426 62 ntBASIC-0.85□□□□□ -2.54
SPTA1P02549 AP003181.2-201ENST00000528941 181 ntBASIC-0.85□□□□□ -2.54
SPTA1P02549 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.85□□□□□ -2.54
SPTA1P02549 AL391834.2-201ENST00000609982 546 ntBASIC-0.85□□□□□ -2.54
SPTA1P02549 RNU6-236P-201ENST00000363886 106 ntBASIC-0.85□□□□□ -2.55
SPTA1P02549 SNORD73A-201ENST00000386062 65 ntBASIC-0.85□□□□□ -2.55
SPTA1P02549 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.85□□□□□ -2.55
SPTA1P02549 AC022784.5-201ENST00000522241 437 ntBASIC-0.85□□□□□ -2.55
SPTA1P02549 MIR5704-201ENST00000584029 77 ntBASIC-0.85□□□□□ -2.55
SPTA1P02549 SNORD11B-201ENST00000607707 90 ntBASIC-0.85□□□□□ -2.55
SPTA1P02549 MIR8055-201ENST00000610739 97 ntBASIC-0.85□□□□□ -2.55
SPTA1P02549 AL121757.2-201ENST00000611223 313 ntBASIC-0.85□□□□□ -2.55
SPTA1P02549 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 SNORD115-30-201ENST00000364117 82 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 RNU6-740P-201ENST00000364734 105 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 SNORA20.2-201ENST00000383922 131 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 RNU6-641P-201ENST00000384006 107 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 SNORD41.1-201ENST00000391000 69 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 RNA5SP494-201ENST00000410653 129 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.86□□□□□ -2.55
SPTA1P02549 RPL30P16-201ENST00000419341 429 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 AC137499.1-201ENST00000427602 88 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 AL031667.1-201ENST00000440222 725 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 MTND2P32-201ENST00000521584 1038 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 AC007012.1-201ENST00000567192 175 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 AC064836.2-201ENST00000609491 462 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 AC023510.2-201ENST00000622162 746 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 RNU6-621P-201ENST00000364752 109 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 SNORD64-201ENST00000386683 67 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 MIR320B2-201ENST00000408479 138 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 AC243428.1-201ENST00000421099 264 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.86□□□□□ -2.55
SPTA1P02549 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.86□□□□□ -2.55
SPTA1P02549 uc_338.10-201ENST00000621872 182 ntBASIC-0.86□□□□□ -2.55
SPTA1P02549 MIR20A-201ENST00000362279 71 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 RNU6-715P-201ENST00000365204 103 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 SNORD115-7-201ENST00000365306 82 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 SNORA72-201ENST00000384339 132 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AC073464.1-201ENST00000429823 534 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 RNU6-437P-201ENST00000459408 95 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 RPL30P10-201ENST00000488148 337 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.87□□□□□ -2.55
SPTA1P02549 AP000942.4-201ENST00000604811 241 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AP001330.5-201ENST00000607176 411 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AP001282.2-201ENST00000616149 309 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 AC007671.2-201ENST00000637344 619 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 RNU6-462P-201ENST00000362659 105 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 RNU6-873P-201ENST00000363833 107 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 SNORD116-9-201ENST00000384000 95 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 SNORA1-201ENST00000384107 130 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 SNORD116-3-201ENST00000384287 95 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 SNORD116-8-201ENST00000384365 95 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 SNORD116-7-201ENST00000384404 95 ntBASIC-0.87□□□□□ -2.55
SPTA1P02549 SNORD116-5-201ENST00000384462 95 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 267.4 ms