Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 JPX_2.1-201ENST00000614161 69 ntBASIC1.41□□□□□ -2.18
DDX58O95786 MIR548AY-201ENST00000617669 107 ntBASIC1.41□□□□□ -2.18
DDX58O95786 AC027279.3-201ENST00000625055 122 ntBASIC1.41□□□□□ -2.18
DDX58O95786 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.41□□□□□ -2.18
DDX58O95786 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
DDX58O95786 SNORD114-22-201ENST00000365423 72 ntBASIC1.4□□□□□ -2.19
DDX58O95786 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
DDX58O95786 MIR522-201ENST00000385071 87 ntBASIC1.4□□□□□ -2.19
DDX58O95786 MIR653-201ENST00000385279 96 ntBASIC1.4□□□□□ -2.19
DDX58O95786 ELOCP20-201ENST00000422460 345 ntBASIC1.4□□□□□ -2.19
DDX58O95786 RNU6-496P-201ENST00000516145 99 ntBASIC1.4□□□□□ -2.19
DDX58O95786 RNU7-115P-201ENST00000516433 55 ntBASIC1.4□□□□□ -2.19
DDX58O95786 AC136628.3-201ENST00000521868 290 ntBASIC1.4□□□□□ -2.19
DDX58O95786 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.4□□□□□ -2.19
DDX58O95786 AL512605.2-201ENST00000592972 256 ntBASIC1.4□□□□□ -2.19
DDX58O95786 AC136443.5-201ENST00000603741 370 ntBASIC1.4□□□□□ -2.19
DDX58O95786 AL355297.3-201ENST00000604082 446 ntBASIC1.4□□□□□ -2.19
DDX58O95786 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.39□□□□□ -2.19
DDX58O95786 AC134026.1-201ENST00000623249 2239 ntBASIC1.39□□□□□ -2.19
DDX58O95786 Y_RNA.105-201ENST00000363182 111 ntBASIC1.39□□□□□ -2.19
DDX58O95786 Y_RNA.203-201ENST00000364106 102 ntBASIC1.39□□□□□ -2.19
DDX58O95786 Y_RNA.214-201ENST00000364201 112 ntBASIC1.39□□□□□ -2.19
DDX58O95786 U8.5-201ENST00000364528 136 ntBASIC1.39□□□□□ -2.19
DDX58O95786 RNU1-93P-201ENST00000364704 169 ntBASIC1.39□□□□□ -2.19
DDX58O95786 snoU2-30.1-201ENST00000365012 70 ntBASIC1.39□□□□□ -2.19
DDX58O95786 RNU6-639P-201ENST00000384074 107 ntBASIC1.39□□□□□ -2.19
DDX58O95786 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.39□□□□□ -2.19
DDX58O95786 HSPE1P25-201ENST00000455484 251 ntBASIC1.39□□□□□ -2.19
DDX58O95786 AC098869.1-201ENST00000481627 292 ntBASIC1.39□□□□□ -2.19
DDX58O95786 RN7SKP179-201ENST00000516126 217 ntBASIC1.39□□□□□ -2.19
DDX58O95786 SNORD45.4-201ENST00000516629 73 ntBASIC1.39□□□□□ -2.19
DDX58O95786 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.39□□□□□ -2.19
DDX58O95786 AC008269.2-201ENST00000561915 1105 ntBASIC1.39□□□□□ -2.19
DDX58O95786 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.39□□□□□ -2.19
DDX58O95786 SNORA4-201ENST00000584302 138 ntBASIC1.39□□□□□ -2.19
DDX58O95786 Y_RNA.222-201ENST00000364264 102 ntBASIC1.38□□□□□ -2.19
DDX58O95786 SNORA33.2-201ENST00000365413 134 ntBASIC1.38□□□□□ -2.19
DDX58O95786 Y_RNA.418-201ENST00000384029 102 ntBASIC1.38□□□□□ -2.19
DDX58O95786 MIR452-201ENST00000385020 85 ntBASIC1.38□□□□□ -2.19
DDX58O95786 MTCO2P33-201ENST00000402100 465 ntBASIC1.38□□□□□ -2.19
DDX58O95786 MIR1298-201ENST00000408783 112 ntBASIC1.38□□□□□ -2.19
DDX58O95786 LINC01399-202ENST00000458450 244 ntBASIC1.38□□□□□ -2.19
DDX58O95786 RNU7-141P-201ENST00000459304 62 ntBASIC1.38□□□□□ -2.19
DDX58O95786 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.38□□□□□ -2.19
DDX58O95786 SNORA31.4-201ENST00000516049 129 ntBASIC1.38□□□□□ -2.19
DDX58O95786 RNU6-191P-201ENST00000516295 94 ntBASIC1.38□□□□□ -2.19
DDX58O95786 RNU6-764P-201ENST00000516396 105 ntBASIC1.38□□□□□ -2.19
DDX58O95786 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
DDX58O95786 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
DDX58O95786 AC127455.1-201ENST00000565496 145 ntBASIC1.38□□□□□ -2.19
DDX58O95786 MIR4762-201ENST00000585261 75 ntBASIC1.38□□□□□ -2.19
DDX58O95786 AC037487.3-201ENST00000606668 112 ntBASIC1.38□□□□□ -2.19
DDX58O95786 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
DDX58O95786 RNU6-514P-201ENST00000384208 107 ntBASIC1.37□□□□□ -2.19
DDX58O95786 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
DDX58O95786 MIR802-201ENST00000390235 94 ntBASIC1.37□□□□□ -2.19
DDX58O95786 SNORA53-201ENST00000391141 249 ntBASIC1.37□□□□□ -2.19
DDX58O95786 SNORA36B-201ENST00000410438 131 ntBASIC1.37□□□□□ -2.19
DDX58O95786 RNU6-121P-201ENST00000410525 99 ntBASIC1.37□□□□□ -2.19
DDX58O95786 RNU2-14P-201ENST00000411053 191 ntBASIC1.37□□□□□ -2.19
DDX58O95786 MRPS35P2-201ENST00000508242 191 ntBASIC1.37□□□□□ -2.19
DDX58O95786 RNU6-1143P-201ENST00000516125 104 ntBASIC1.37□□□□□ -2.19
DDX58O95786 RNU6-1137P-201ENST00000517073 99 ntBASIC1.37□□□□□ -2.19
DDX58O95786 AL078603.1-201ENST00000603824 313 ntBASIC1.37□□□□□ -2.19
DDX58O95786 BX284668.6-201ENST00000606899 438 ntBASIC1.37□□□□□ -2.19
DDX58O95786 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.37□□□□□ -2.19
DDX58O95786 MIR6767-201ENST00000637302 66 ntBASIC1.37□□□□□ -2.19
DDX58O95786 Y_RNA.64-201ENST00000362845 102 ntBASIC1.36□□□□□ -2.19
DDX58O95786 RNU6-801P-201ENST00000364087 105 ntBASIC1.36□□□□□ -2.19
DDX58O95786 RNU6-1227P-201ENST00000383981 107 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORA72.4-201ENST00000384174 132 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
DDX58O95786 MIR526A1-201ENST00000384897 85 ntBASIC1.36□□□□□ -2.19
DDX58O95786 MIR516B2-201ENST00000385190 85 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORD41-201ENST00000386967 70 ntBASIC1.36□□□□□ -2.19
DDX58O95786 Y_RNA.581-201ENST00000391017 97 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
DDX58O95786 SNORA25.1-201ENST00000362326 128 ntBASIC1.35□□□□□ -2.19
DDX58O95786 SNORD114-27-201ENST00000363766 70 ntBASIC1.35□□□□□ -2.19
DDX58O95786 SNORD14E-201ENST00000364009 85 ntBASIC1.35□□□□□ -2.19
DDX58O95786 SNORD50B-201ENST00000364995 70 ntBASIC1.35□□□□□ -2.19
DDX58O95786 RNU6-806P-201ENST00000365147 105 ntBASIC1.35□□□□□ -2.19
DDX58O95786 RNU6-290P-201ENST00000365212 101 ntBASIC1.35□□□□□ -2.19
DDX58O95786 MIR215-201ENST00000384858 110 ntBASIC1.35□□□□□ -2.19
DDX58O95786 MTCYBP6-201ENST00000441810 138 ntBASIC1.35□□□□□ -2.19
DDX58O95786 RNU6-437P-201ENST00000459408 95 ntBASIC1.35□□□□□ -2.19
DDX58O95786 AL133373.1-201ENST00000497098 94 ntBASIC1.35□□□□□ -2.19
DDX58O95786 RNU2-31P-201ENST00000516954 155 ntBASIC1.35□□□□□ -2.19
DDX58O95786 MIR2681-201ENST00000581814 105 ntBASIC1.35□□□□□ -2.19
DDX58O95786 AL022345.2-201ENST00000606307 135 ntBASIC1.35□□□□□ -2.19
DDX58O95786 Y_RNA.136-201ENST00000363444 102 ntBASIC1.34□□□□□ -2.19
DDX58O95786 RNU6-1209P-201ENST00000363655 107 ntBASIC1.34□□□□□ -2.19
DDX58O95786 SNORA26.5-201ENST00000391215 123 ntBASIC1.34□□□□□ -2.19
DDX58O95786 RNU6-985P-201ENST00000410182 104 ntBASIC1.34□□□□□ -2.19
DDX58O95786 RPL21P38-201ENST00000418090 167 ntBASIC1.34□□□□□ -2.19
DDX58O95786 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.34□□□□□ -2.19
DDX58O95786 MTCO1P5-201ENST00000433573 344 ntBASIC1.34□□□□□ -2.19
DDX58O95786 AP003733.2-201ENST00000529409 171 ntBASIC1.34□□□□□ -2.19
DDX58O95786 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.34□□□□□ -2.19
DDX58O95786 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 251 ms