Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNU6-203P-201ENST00000384038 104 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 Y_RNA.515-201ENST00000384535 112 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 MIR522-201ENST00000385071 87 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 RNA5SP489-201ENST00000410986 109 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 RNU6-847P-201ENST00000411115 108 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC3O60481 snoU13.23-201ENST00000458863 104 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 SNORD11-201ENST00000459124 84 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.62□□□□□ -2.15
ZIC3O60481 RNY3P16-201ENST00000516338 101 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC3O60481 RPL23AP91-201ENST00000569211 455 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 Y_RNA.83-201ENST00000363005 113 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 snoU2_19.4-201ENST00000364329 80 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 RNU6-1318P-201ENST00000365389 103 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 MIR194-1-201ENST00000384892 85 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
ZIC3O60481 RNA5SP496-201ENST00000391240 109 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 RNU6-381P-201ENST00000391259 108 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 AL161935.2-201ENST00000414627 60 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 CALM2P4-201ENST00000430810 426 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 FTH1P12-201ENST00000432137 551 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 SNRPGP10-201ENST00000432323 225 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 AC015712.3-201ENST00000559380 164 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 MIR4419B-201ENST00000577260 68 ntBASIC1.61□□□□□ -2.15
ZIC3O60481 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ZIC3O60481 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZIC3O60481 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ZIC3O60481 MIR411-201ENST00000362239 96 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 SNORD68-201ENST00000363214 84 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 Y_RNA.229-201ENST00000364347 113 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 Y_RNA.274-201ENST00000364714 101 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 RNU6-200P-201ENST00000364743 107 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 Y_RNA.308-201ENST00000365043 101 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 RNU6-424P-201ENST00000384367 105 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 U8.16-201ENST00000391279 133 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 NDUFA4P2-201ENST00000489989 244 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.6□□□□□ -2.15
ZIC3O60481 SCARNA8-201ENST00000515924 131 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 RNA5SP168-201ENST00000516642 112 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 RNU6-794P-201ENST00000517261 64 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ZIC3O60481 AC090425.1-201ENST00000610007 140 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 JPX_2.1-201ENST00000614161 69 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 uc_338.20-201ENST00000621563 178 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 AC084768.2-201ENST00000622736 221 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 AC095038.3-201ENST00000634439 195 ntBASIC1.6□□□□□ -2.15
ZIC3O60481 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZIC3O60481 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZIC3O60481 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
ZIC3O60481 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.59□□□□□ -2.15
ZIC3O60481 MIR424-201ENST00000362227 98 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 RNU6-414P-201ENST00000363705 104 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 RNU6-923P-201ENST00000364753 107 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 RNU4-17P-201ENST00000365598 141 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 HMGN2P23-201ENST00000456759 269 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 RN7SL274P-201ENST00000492268 272 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.59□□□□□ -2.15
ZIC3O60481 SNORA77B-201ENST00000578179 125 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 MIR4308-201ENST00000580634 81 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 AL513423.1-201ENST00000621695 132 ntBASIC1.59□□□□□ -2.15
ZIC3O60481 RNA5SP99-201ENST00000364020 114 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 MIR616-201ENST00000385293 97 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
ZIC3O60481 RNU6-131P-201ENST00000391144 107 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 RNU6-493P-201ENST00000391321 108 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 MLLT10P1-201ENST00000418346 262 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 RPL30P13-201ENST00000418873 348 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 AC108059.2-201ENST00000434626 151 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 PGBD4P5-201ENST00000445958 426 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 RNU6-138P-201ENST00000515952 107 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 RNU6-548P-201ENST00000517083 115 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 RNU6-1116P-201ENST00000517269 99 ntBASIC1.58□□□□□ -2.16
ZIC3O60481 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.58□□□□□ -2.16
ZIC3O60481 Y_RNA.297-201ENST00000364950 91 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 MIR660-201ENST00000385235 97 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 RNU6-918P-201ENST00000391219 106 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 AC004965.1-201ENST00000413033 213 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.57□□□□□ -2.16
ZIC3O60481 RN7SKP164-201ENST00000516138 266 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 RNU6-453P-201ENST00000516819 85 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 AC087685.1-201ENST00000587507 141 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 AC120024.3-201ENST00000603167 156 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 uc_338.4-201ENST00000616635 176 ntBASIC1.57□□□□□ -2.16
ZIC3O60481 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ZIC3O60481 RNU6-1123P-201ENST00000362347 106 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 SNORD50B-201ENST00000364995 70 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 RNU6-47P-201ENST00000383866 107 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 MT-TT-201ENST00000387460 66 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 AL627390.1-201ENST00000396055 340 ntBASIC1.56□□□□□ -2.16
ZIC3O60481 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.56□□□□□ -2.16
ZIC3O60481 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms