Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL096861.1-201ENST00000610899 123 ntBASIC0.98□□□□□ -2.25
LCMT2O60294 MIR376A1-201ENST00000616574 68 ntBASIC0.98□□□□□ -2.25
LCMT2O60294 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
LCMT2O60294 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
LCMT2O60294 RNU6-797P-201ENST00000363101 109 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 Y_RNA.336-201ENST00000365307 109 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 SNORA63.7-201ENST00000365579 123 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 MIR548P-201ENST00000408336 84 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 RNU6-101P-201ENST00000410323 104 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 RNU6-1054P-201ENST00000411293 104 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.97□□□□□ -2.25
LCMT2O60294 AC024067.1-201ENST00000426199 223 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 RPS23P4-201ENST00000487908 423 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 RPL23AP54-201ENST00000495129 419 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.97□□□□□ -2.25
LCMT2O60294 RNU6-496P-201ENST00000516145 99 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 RNU6-191P-201ENST00000516295 94 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 RNU7-116P-201ENST00000516940 62 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 AC090142.3-201ENST00000519012 385 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 AC127455.1-201ENST00000565496 145 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.97□□□□□ -2.25
LCMT2O60294 MIR6504-201ENST00000613520 61 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 MIR548AY-201ENST00000617669 107 ntBASIC0.97□□□□□ -2.25
LCMT2O60294 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
LCMT2O60294 AC134026.1-201ENST00000623249 2239 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 RNU6-1084P-201ENST00000362498 107 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 Y_RNA.191-201ENST00000363972 113 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 Y_RNA.203-201ENST00000364106 102 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
LCMT2O60294 RNU6-910P-201ENST00000390844 107 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 SNORA26.5-201ENST00000391215 123 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 MIR1278-201ENST00000408753 81 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 AC245047.7-201ENST00000440265 293 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 RNU7-141P-201ENST00000459304 62 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 AC098869.1-201ENST00000481627 292 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 AC136628.3-201ENST00000521868 290 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
LCMT2O60294 MIR3192-201ENST00000584920 77 ntBASIC0.96□□□□□ -2.26
LCMT2O60294 Y_RNA.26-201ENST00000362539 101 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 Y_RNA.214-201ENST00000364201 112 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 RNU6-806P-201ENST00000365147 105 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 AC117470.1-201ENST00000381974 330 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 SNORA72.4-201ENST00000384174 132 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 Y_RNA.527-201ENST00000384573 102 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 MIR452-201ENST00000385020 85 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 RNU6-131P-201ENST00000391144 107 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 ELOCP20-201ENST00000422460 345 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 UBL5P1-201ENST00000507979 193 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 SNORA31.4-201ENST00000516049 129 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 RNU6-1137P-201ENST00000517073 99 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 MIR4452-201ENST00000583004 71 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
LCMT2O60294 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.95□□□□□ -2.26
LCMT2O60294 MIR96-201ENST00000362288 78 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 Y_RNA.158-201ENST00000363651 101 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 RNU6-1209P-201ENST00000363655 107 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 Y_RNA.796-201ENST00000364268 102 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 Y_RNA.269-201ENST00000364685 89 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 Y_RNA.799-201ENST00000364992 102 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 RNU6-969P-201ENST00000383900 105 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 MIR215-201ENST00000384858 110 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 SNORA36B-201ENST00000410438 131 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 LINC01399-202ENST00000458450 244 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 NDUFA4P2-201ENST00000489989 244 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 RPS26P48-201ENST00000491713 339 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.94□□□□□ -2.26
LCMT2O60294 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.94□□□□□ -2.26
LCMT2O60294 SNORD111.1-201ENST00000516421 86 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 Y_RNA.721-201ENST00000517207 102 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 AL357312.1-201ENST00000603879 298 ntBASIC0.94□□□□□ -2.26
LCMT2O60294 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
LCMT2O60294 snoU2_19.2-201ENST00000363024 80 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 Y_RNA.136-201ENST00000363444 102 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 snoU2-30.1-201ENST00000365012 70 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 SNORD114-22-201ENST00000365423 72 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 Y_RNA.455-201ENST00000384230 98 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 Y_RNA.569-201ENST00000384749 103 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.93□□□□□ -2.26
LCMT2O60294 MTCO1P5-201ENST00000433573 344 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 U8.19-201ENST00000459095 133 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 RNU6-764P-201ENST00000516396 105 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 AC131281.1-201ENST00000522984 164 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 AC113195.1-201ENST00000579952 141 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 MIR4680-201ENST00000580906 66 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 AC136443.5-201ENST00000603741 370 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 AC068700.1-201ENST00000565862 3754 ntBASIC0.93□□□□□ -2.26
LCMT2O60294 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
LCMT2O60294 RNU4-90P-201ENST00000362773 141 ntBASIC0.92□□□□□ -2.26
LCMT2O60294 RNU6-770P-201ENST00000363929 105 ntBASIC0.92□□□□□ -2.26
LCMT2O60294 Y_RNA.210-201ENST00000364161 110 ntBASIC0.92□□□□□ -2.26
LCMT2O60294 Y_RNA.380-201ENST00000365663 111 ntBASIC0.92□□□□□ -2.26
LCMT2O60294 MIR136-201ENST00000385207 82 ntBASIC0.92□□□□□ -2.26
LCMT2O60294 RNU6-763P-201ENST00000390865 106 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 267.6 ms