Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MCFD2P1-201ENST00000417812 300 ntBASIC0.79□□□□□ -2.28
MSH4O15457 snoU13.25-201ENST00000458945 104 ntBASIC0.79□□□□□ -2.28
MSH4O15457 RNU7-90P-201ENST00000459216 62 ntBASIC0.79□□□□□ -2.28
MSH4O15457 RNU7-110P-201ENST00000516891 62 ntBASIC0.79□□□□□ -2.28
MSH4O15457 AC022616.4-201ENST00000522985 181 ntBASIC0.79□□□□□ -2.28
MSH4O15457 AC040926.1-201ENST00000530195 238 ntBASIC0.79□□□□□ -2.28
MSH4O15457 PART1_1.1-201ENST00000611761 217 ntBASIC0.79□□□□□ -2.28
MSH4O15457 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.79□□□□□ -2.28
MSH4O15457 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
MSH4O15457 MTND4P29-201ENST00000503122 1372 ntBASIC0.79□□□□□ -2.28
MSH4O15457 Y_RNA.230-201ENST00000364348 109 ntBASIC0.78□□□□□ -2.28
MSH4O15457 Y_RNA.253-201ENST00000364562 112 ntBASIC0.78□□□□□ -2.28
MSH4O15457 RNU6-450P-201ENST00000364654 107 ntBASIC0.78□□□□□ -2.28
MSH4O15457 RNU5E-4P-201ENST00000364931 120 ntBASIC0.78□□□□□ -2.28
MSH4O15457 RNU1-115P-201ENST00000365329 160 ntBASIC0.78□□□□□ -2.28
MSH4O15457 SNORD14.1-201ENST00000365609 90 ntBASIC0.78□□□□□ -2.28
MSH4O15457 Y_RNA.509-201ENST00000384506 99 ntBASIC0.78□□□□□ -2.28
MSH4O15457 Y_RNA.540-201ENST00000384638 111 ntBASIC0.78□□□□□ -2.28
MSH4O15457 RNU6-855P-201ENST00000410395 104 ntBASIC0.78□□□□□ -2.28
MSH4O15457 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.78□□□□□ -2.28
MSH4O15457 AC117454.1-201ENST00000491120 168 ntBASIC0.78□□□□□ -2.28
MSH4O15457 RNU6-1170P-201ENST00000515974 106 ntBASIC0.78□□□□□ -2.28
MSH4O15457 RNU6-397P-201ENST00000516226 104 ntBASIC0.78□□□□□ -2.28
MSH4O15457 RNU6-1046P-201ENST00000516538 107 ntBASIC0.78□□□□□ -2.28
MSH4O15457 SNORA40.14-201ENST00000516543 86 ntBASIC0.78□□□□□ -2.28
MSH4O15457 AC011373.1-201ENST00000607270 237 ntBASIC0.78□□□□□ -2.28
MSH4O15457 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.78□□□□□ -2.28
MSH4O15457 AC010205.1-201ENST00000616668 449 ntBASIC0.78□□□□□ -2.28
MSH4O15457 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
MSH4O15457 RNU6-1084P-201ENST00000362498 107 ntBASIC0.77□□□□□ -2.29
MSH4O15457 Y_RNA.112-201ENST00000363250 102 ntBASIC0.77□□□□□ -2.29
MSH4O15457 Y_RNA.286-201ENST00000364813 102 ntBASIC0.77□□□□□ -2.29
MSH4O15457 RNU1-133P-201ENST00000364867 167 ntBASIC0.77□□□□□ -2.29
MSH4O15457 Y_RNA.341-201ENST00000365341 102 ntBASIC0.77□□□□□ -2.29
MSH4O15457 Y_RNA.439-201ENST00000384119 94 ntBASIC0.77□□□□□ -2.29
MSH4O15457 Y_RNA.445-201ENST00000384168 102 ntBASIC0.77□□□□□ -2.29
MSH4O15457 RNU6-474P-201ENST00000384243 107 ntBASIC0.77□□□□□ -2.29
MSH4O15457 MIR508-201ENST00000384857 115 ntBASIC0.77□□□□□ -2.29
MSH4O15457 MIR598-201ENST00000384868 97 ntBASIC0.77□□□□□ -2.29
MSH4O15457 MIR522-201ENST00000385071 87 ntBASIC0.77□□□□□ -2.29
MSH4O15457 MTND4P19-201ENST00000446659 478 ntBASIC0.77□□□□□ -2.29
MSH4O15457 AC005042.3-201ENST00000453230 174 ntBASIC0.77□□□□□ -2.29
MSH4O15457 AC090142.3-201ENST00000519012 385 ntBASIC0.77□□□□□ -2.29
MSH4O15457 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.77□□□□□ -2.29
MSH4O15457 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.77□□□□□ -2.29
MSH4O15457 C8orf59P2-201ENST00000603441 271 ntBASIC0.77□□□□□ -2.29
MSH4O15457 AC005972.2-201ENST00000604690 348 ntBASIC0.77□□□□□ -2.29
MSH4O15457 AL121655.1-201ENST00000605811 308 ntBASIC0.77□□□□□ -2.29
MSH4O15457 AC090971.5-201ENST00000621102 293 ntBASIC0.77□□□□□ -2.29
MSH4O15457 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.76□□□□□ -2.29
MSH4O15457 RNU6-1048P-201ENST00000364054 107 ntBASIC0.76□□□□□ -2.29
MSH4O15457 SNORD42.2-201ENST00000365570 69 ntBASIC0.76□□□□□ -2.29
MSH4O15457 Y_RNA.424-201ENST00000384063 103 ntBASIC0.76□□□□□ -2.29
MSH4O15457 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
MSH4O15457 MIR136-201ENST00000385207 82 ntBASIC0.76□□□□□ -2.29
MSH4O15457 Y_RNA.645-201ENST00000391229 102 ntBASIC0.76□□□□□ -2.29
MSH4O15457 AC022028.1-201ENST00000412054 408 ntBASIC0.76□□□□□ -2.29
MSH4O15457 AL390729.2-201ENST00000416137 156 ntBASIC0.76□□□□□ -2.29
MSH4O15457 PMCHL1-202ENST00000423102 261 ntBASIC0.76□□□□□ -2.29
MSH4O15457 RNU6-1132P-201ENST00000459214 107 ntBASIC0.76□□□□□ -2.29
MSH4O15457 U8.20-201ENST00000459445 131 ntBASIC0.76□□□□□ -2.29
MSH4O15457 SNORD45.4-201ENST00000516629 73 ntBASIC0.76□□□□□ -2.29
MSH4O15457 SNORA74.3-201ENST00000517108 154 ntBASIC0.76□□□□□ -2.29
MSH4O15457 MIR4423-201ENST00000580922 80 ntBASIC0.76□□□□□ -2.29
MSH4O15457 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
MSH4O15457 RNA5SP264-201ENST00000363115 107 ntBASIC0.75□□□□□ -2.29
MSH4O15457 AC117470.1-201ENST00000381974 330 ntBASIC0.75□□□□□ -2.29
MSH4O15457 RNU6-21P-201ENST00000384710 107 ntBASIC0.75□□□□□ -2.29
MSH4O15457 MIR520C-201ENST00000385005 87 ntBASIC0.75□□□□□ -2.29
MSH4O15457 RNU2-64P-201ENST00000411315 191 ntBASIC0.75□□□□□ -2.29
MSH4O15457 RPS3AP1-201ENST00000413190 320 ntBASIC0.75□□□□□ -2.29
MSH4O15457 RNU6-197P-201ENST00000516680 100 ntBASIC0.75□□□□□ -2.29
MSH4O15457 AC004812.1-201ENST00000540773 146 ntBASIC0.75□□□□□ -2.29
MSH4O15457 AC133485.1-201ENST00000567176 124 ntBASIC0.75□□□□□ -2.29
MSH4O15457 AC138907.6-201ENST00000568401 126 ntBASIC0.75□□□□□ -2.29
MSH4O15457 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.75□□□□□ -2.29
MSH4O15457 AC124312.5-201ENST00000604451 268 ntBASIC0.75□□□□□ -2.29
MSH4O15457 AL138825.1-201ENST00000618587 192 ntBASIC0.75□□□□□ -2.29
MSH4O15457 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.75□□□□□ -2.29
MSH4O15457 MIR103A2-201ENST00000362154 78 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.138-201ENST00000363462 102 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.148-201ENST00000363557 117 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.216-201ENST00000364205 93 ntBASIC0.74□□□□□ -2.29
MSH4O15457 RNU4-50P-201ENST00000364361 141 ntBASIC0.74□□□□□ -2.29
MSH4O15457 U8.7-201ENST00000364940 136 ntBASIC0.74□□□□□ -2.29
MSH4O15457 snoU2-30.1-201ENST00000365012 70 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.310-201ENST00000365063 113 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.330-201ENST00000365230 109 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.383-201ENST00000383855 97 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.395-201ENST00000383945 109 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.462-201ENST00000384268 102 ntBASIC0.74□□□□□ -2.29
MSH4O15457 SNORA72-201ENST00000384339 132 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.551-201ENST00000384661 102 ntBASIC0.74□□□□□ -2.29
MSH4O15457 MIR15B-201ENST00000385045 98 ntBASIC0.74□□□□□ -2.29
MSH4O15457 RNU6-131P-201ENST00000391144 107 ntBASIC0.74□□□□□ -2.29
MSH4O15457 MIR1302-11-201ENST00000408051 138 ntBASIC0.74□□□□□ -2.29
MSH4O15457 MIR1302-9-201ENST00000408365 138 ntBASIC0.74□□□□□ -2.29
MSH4O15457 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
MSH4O15457 MIR1302-10-201ENST00000408734 138 ntBASIC0.74□□□□□ -2.29
MSH4O15457 Y_RNA.602-201ENST00000410535 92 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 268.4 ms