Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 Y_RNA.92-201ENST00000363043 102 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.235-201ENST00000364412 102 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.267-201ENST00000364679 109 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 SNORA20.1-201ENST00000364790 130 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.306-201ENST00000365015 102 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.312-201ENST00000365089 102 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.322-201ENST00000365151 102 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 SNORA70.7-201ENST00000384159 133 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.572-201ENST00000384757 98 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.21□□□□□ -2.22
HDAC3O15379 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.650-201ENST00000459002 102 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.638-201ENST00000459374 113 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.21□□□□□ -2.22
HDAC3O15379 RNY3P16-201ENST00000516338 101 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.777-201ENST00000516982 102 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.771-201ENST00000598668 102 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 AP003357.1-201ENST00000604497 148 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 AC005972.2-201ENST00000604690 348 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 AC090425.1-201ENST00000610007 140 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 MIR548AY-201ENST00000617669 107 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 MIR8054-201ENST00000620877 86 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.789-201ENST00000622480 102 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
HDAC3O15379 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 MIR378A-201ENST00000362177 66 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 RNU6-1080P-201ENST00000383982 107 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 RNU6-1323P-201ENST00000384025 107 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HDAC3O15379 RNU6-1248P-201ENST00000391096 64 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 MIR1278-201ENST00000408753 81 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 Y_RNA.590-201ENST00000410140 107 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 RNU2-7P-201ENST00000410794 178 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 RNU6-383P-201ENST00000410864 94 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 BTF3P4-201ENST00000418852 495 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 AL603825.1-201ENST00000438481 80 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 AC233266.1-201ENST00000454518 96 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 RPL36AP21-201ENST00000490372 323 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 AC011604.1-201ENST00000545978 196 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 DNAJC19P9-201ENST00000555084 351 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 AC127455.1-201ENST00000565496 145 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 POLR3GP1-201ENST00000594073 261 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 BX284668.6-201ENST00000606899 438 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 AC242852.1-201ENST00000612151 96 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 AL078604.3-201ENST00000615580 211 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 AC013791.1-201ENST00000616619 62 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 AC244015.1-201ENST00000622301 99 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 AC100821.1-201ENST00000523153 2479 ntBASIC1.2□□□□□ -2.22
HDAC3O15379 Y_RNA.292-201ENST00000364904 97 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 RNY4P28-201ENST00000365281 93 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 Y_RNA.476-201ENST00000384347 108 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 Y_RNA.478-201ENST00000384358 107 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 Y_RNA.489-201ENST00000384410 101 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 RNU6-440P-201ENST00000390882 105 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 SNORA36B-201ENST00000410438 131 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 AC069257.2-201ENST00000441819 155 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 STAG3L5P-204ENST00000443759 179 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 RNU7-95P-201ENST00000459222 64 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 snoU13.27-201ENST00000459278 104 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 RNU7-34P-201ENST00000459394 64 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 AC005908.1-201ENST00000468701 347 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 Y_RNA.679-201ENST00000516416 91 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 RNU6-341P-201ENST00000516973 96 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 MIR5692C2-201ENST00000577959 77 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 MIR3671-201ENST00000580455 88 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 AC021506.2-201ENST00000612354 169 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 AL442067.1-201ENST00000613261 223 ntBASIC1.19□□□□□ -2.22
HDAC3O15379 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.19□□□□□ -2.22
HDAC3O15379 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HDAC3O15379 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.18□□□□□ -2.22
HDAC3O15379 RNU6-653P-201ENST00000363074 106 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 RNU6-899P-201ENST00000363947 107 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 RNY1-201ENST00000364228 113 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 Y_RNA.274-201ENST00000364714 101 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 AL161935.2-201ENST00000414627 60 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.18□□□□□ -2.22
HDAC3O15379 RPL23AP54-201ENST00000495129 419 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.18□□□□□ -2.22
HDAC3O15379 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.18□□□□□ -2.22
HDAC3O15379 RNU1-92P-201ENST00000517017 135 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.18□□□□□ -2.22
HDAC3O15379 AC130289.1-201ENST00000577321 73 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 AC009779.6-201ENST00000603972 165 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 AL512598.1-201ENST00000610158 273 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 AL365265.1-201ENST00000621045 234 ntBASIC1.18□□□□□ -2.22
HDAC3O15379 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HDAC3O15379 Y_RNA.304-201ENST00000365011 112 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 SNORA72-201ENST00000384339 132 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 RNU6-1031P-201ENST00000384773 107 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 MIR194-1-201ENST00000384892 85 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 MIR520G-201ENST00000385064 90 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 Y_RNA.621-201ENST00000411065 96 ntBASIC1.17□□□□□ -2.22
HDAC3O15379 Y_RNA.626-201ENST00000411288 95 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms