Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RNU6-969P-201ENST00000383900 105 ntBASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 Y_RNA.785-201ENST00000384290 109 ntBASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR1289-2-201ENST00000408360 111 ntBASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 SNRPGP10-201ENST00000432323 225 ntBASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 SNORA31.10-201ENST00000516482 106 ntBASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR3668-201ENST00000582138 75 ntBASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-661P-201ENST00000362409 107 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 Y_RNA.24-201ENST00000362508 103 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 Y_RNA.121-201ENST00000363309 113 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-1209P-201ENST00000363655 107 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-1020P-201ENST00000363684 107 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-414P-201ENST00000363705 104 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 Y_RNA.297-201ENST00000364950 91 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-131P-201ENST00000391144 107 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 RN7SKP101-201ENST00000411376 320 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 STAG3L5P-204ENST00000443759 179 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU7-34P-201ENST00000459394 64 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 AC104435.1-201ENST00000483483 166 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 RPS27P21-201ENST00000486977 252 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 AC015712.3-201ENST00000559380 164 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 AC022254.1-201ENST00000567857 235 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR4299-201ENST00000577899 72 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR4762-201ENST00000585261 75 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 AL627230.6-201ENST00000611129 280 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 AL391903.3-201ENST00000612158 163 ntBASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
PCDHGA3Q9Y5H0 Y_RNA.29-201ENST00000362570 113 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 U8.5-201ENST00000364528 136 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.308-201ENST00000365043 101 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR616-201ENST00000385293 97 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU2-40P-201ENST00000410833 196 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 AL356379.1-201ENST00000414105 126 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 AL591806.2-201ENST00000433122 173 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 PGBD4P5-201ENST00000445958 426 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 SNORA44.1-201ENST00000517031 108 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 RPL23AP91-201ENST00000569211 455 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 AL591926.4-201ENST00000616895 298 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHGA3Q9Y5H0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.7-201ENST00000362352 102 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 SNORD68-201ENST00000363214 84 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.435-201ENST00000384095 112 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-1228P-201ENST00000391014 107 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-383P-201ENST00000410864 94 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.793-201ENST00000411222 111 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.644-201ENST00000459006 113 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 OR9P1P-201ENST00000496431 281 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 MRPS17P9-201ENST00000511924 393 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-138P-201ENST00000515952 107 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.674-201ENST00000516362 113 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-182P-201ENST00000516970 105 ntBASIC2.14□□□□□ -2.07
PCDHGA3Q9Y5H0 SNORA4.2-201ENST00000365313 147 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-482P-201ENST00000391068 107 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-381P-201ENST00000391259 108 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU2-55P-201ENST00000411146 174 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR4662B-201ENST00000579498 81 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 AL513423.1-201ENST00000621695 132 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 AC027279.3-201ENST00000625055 122 ntBASIC2.13□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.229-201ENST00000364347 113 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR522-201ENST00000385071 87 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR764-201ENST00000390811 85 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 MLLT10P1-201ENST00000418346 262 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 Z98949.2-201ENST00000440996 144 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 HMGN2P32-201ENST00000444648 269 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 AC072026.1-201ENST00000605023 201 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 uc_338.4-201ENST00000616635 176 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU4-10P-201ENST00000364383 140 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 Y_RNA.274-201ENST00000364714 101 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 RNU4-70P-201ENST00000384579 139 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 SNORA64-201ENST00000384674 134 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 CYCTP-201ENST00000504253 315 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 SNORA81.3-201ENST00000517283 198 ntBASIC2.11□□□□□ -2.07
PCDHGA3Q9Y5H0 CBX3P4-201ENST00000538909 354 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms