Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
SSU72Q9NP77 FAM35CP-201ENST00000554755 2470 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SSU72Q9NP77 RNU6-640P-201ENST00000363693 105 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 Y_RNA.198-201ENST00000364013 98 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 SNORA71.1-201ENST00000364523 117 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 Y_RNA.369-201ENST00000365568 117 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 Y_RNA.440-201ENST00000384120 114 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 RNA5SP109-201ENST00000391010 116 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 AC005326.1-201ENST00000429197 123 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 AL445687.1-201ENST00000439946 251 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 RNY4P20-201ENST00000516678 93 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 RNU6-537P-201ENST00000517277 103 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.78□□□□□ -1.96
SSU72Q9NP77 AC034105.4-201ENST00000568304 277 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 MIR5004-201ENST00000579078 107 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 RNU6-94P-201ENST00000607728 107 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.78□□□□□ -1.96
SSU72Q9NP77 AC022202.1-201ENST00000613515 211 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 U4atac.1-201ENST00000618345 95 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 AC106754.2-201ENST00000623006 233 ntBASIC2.78□□□□□ -1.96
SSU72Q9NP77 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.97
SSU72Q9NP77 ZNF720P1-201ENST00000562403 1939 ntBASIC2.78□□□□□ -1.97
SSU72Q9NP77 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.77□□□□□ -1.97
SSU72Q9NP77 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSU72Q9NP77 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSU72Q9NP77 Y_RNA.163-201ENST00000363702 113 ntBASIC2.77□□□□□ -1.97
SSU72Q9NP77 SNORD14E-201ENST00000364009 85 ntBASIC2.77□□□□□ -1.97
SSU72Q9NP77 snoU2-30.1-201ENST00000365012 70 ntBASIC2.77□□□□□ -1.97
SSU72Q9NP77 AL109933.2-201ENST00000452651 260 ntBASIC2.77□□□□□ -1.97
SSU72Q9NP77 SNORA84-201ENST00000459229 133 ntBASIC2.77□□□□□ -1.97
SSU72Q9NP77 AC008885.1-201ENST00000514930 301 ntBASIC2.77□□□□□ -1.97
SSU72Q9NP77 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SSU72Q9NP77 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.77□□□□□ -1.97
SSU72Q9NP77 AC008739.3-201ENST00000603262 127 ntBASIC2.77□□□□□ -1.97
SSU72Q9NP77 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SSU72Q9NP77 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSU72Q9NP77 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSU72Q9NP77 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SSU72Q9NP77 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SSU72Q9NP77 RNU6-1084P-201ENST00000362498 107 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 Y_RNA.323-201ENST00000365157 109 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 RNU6-1014P-201ENST00000383940 103 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 RNU6-1104P-201ENST00000384723 104 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 AC245047.3-201ENST00000429428 127 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 AL445646.1-201ENST00000431784 216 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.76□□□□□ -1.97
SSU72Q9NP77 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.76□□□□□ -1.97
SSU72Q9NP77 AC006483.1-201ENST00000487308 313 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SSU72Q9NP77 SNORA72.7-201ENST00000516349 94 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 RNU6-830P-201ENST00000516353 107 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 RNU6-1116P-201ENST00000517269 99 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 AC010297.1-201ENST00000623948 149 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.76□□□□□ -1.97
SSU72Q9NP77 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.76□□□□□ -1.97
SSU72Q9NP77 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSU72Q9NP77 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SSU72Q9NP77 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSU72Q9NP77 MIRLET7C-201ENST00000362160 84 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 RNU6-766P-201ENST00000362478 107 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 SNORA63.5-201ENST00000363548 123 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 SNORA80E-201ENST00000384744 137 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 RNA5SP482-201ENST00000391269 118 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.75□□□□□ -1.97
SSU72Q9NP77 HMGN2P32-201ENST00000444648 269 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 RN7SL542P-201ENST00000467147 294 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 SNORA31.10-201ENST00000516482 106 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 SNORA31.26-201ENST00000517250 137 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 MIR92B-201ENST00000607575 96 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 MIR7112-201ENST00000616126 65 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 AP001318.4-201ENST00000616637 121 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.75□□□□□ -1.97
SSU72Q9NP77 AL442644.1-201ENST00000454390 3105 ntBASIC2.75□□□□□ -1.97
SSU72Q9NP77 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSU72Q9NP77 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SSU72Q9NP77 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 RNU6-690P-201ENST00000365242 106 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 Y_RNA.336-201ENST00000365307 109 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 Y_RNA.362-201ENST00000365518 110 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 RNU6-756P-201ENST00000383997 107 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 SNORA51.10-201ENST00000384418 136 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 MIR802-201ENST00000390235 94 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 RNY4P30-201ENST00000410216 95 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.74□□□□□ -1.97
SSU72Q9NP77 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.74□□□□□ -1.97
SSU72Q9NP77 SNORA31.4-201ENST00000516049 129 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.74□□□□□ -1.97
SSU72Q9NP77 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.74□□□□□ -1.97
SSU72Q9NP77 MIR3158-1-201ENST00000583596 81 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 HSPE1P19-201ENST00000603327 295 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
SSU72Q9NP77 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSU72Q9NP77 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.73□□□□□ -1.97
SSU72Q9NP77 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.73□□□□□ -1.97
SSU72Q9NP77 AC092435.3-201ENST00000565538 3654 ntBASIC2.73□□□□□ -1.97
SSU72Q9NP77 RNU6-23P-201ENST00000363283 107 ntBASIC2.73□□□□□ -1.97
SSU72Q9NP77 Y_RNA.298-201ENST00000364960 107 ntBASIC2.73□□□□□ -1.97
SSU72Q9NP77 DEFA7P-201ENST00000382676 285 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms