Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AL929325.1-201ENST00000603096 117 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 AL365434.2-201ENST00000607979 234 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 MIR6079-201ENST00000635807 62 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RTL3Q8N8U3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.461-201ENST00000384263 103 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.556-201ENST00000384677 113 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 MIR520G-201ENST00000385064 90 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 RNU6-1248P-201ENST00000391096 64 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 RNU11-5P-201ENST00000391216 129 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 RNA5SP511-201ENST00000410487 115 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 AC024067.1-201ENST00000426199 223 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 RNU6-63P-201ENST00000516690 95 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 RNU6-341P-201ENST00000516973 96 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 RNU6-570P-201ENST00000517051 105 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 AC136628.3-201ENST00000521868 290 ntBASIC1.36□□□□□ -2.19
RTL3Q8N8U3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.36□□□□□ -2.19
RTL3Q8N8U3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.36□□□□□ -2.19
RTL3Q8N8U3 SNORA7.1-201ENST00000363750 139 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 RNU6-801P-201ENST00000364087 105 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.237-201ENST00000364439 102 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 SNORA53-201ENST00000391141 249 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 MIR1302-6-201ENST00000408466 90 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 RN7SKP200-201ENST00000410564 320 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.35□□□□□ -2.19
RTL3Q8N8U3 AC091021.1-201ENST00000468051 388 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 SNORA31.10-201ENST00000516482 106 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 AL358944.1-201ENST00000528537 144 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.35□□□□□ -2.19
RTL3Q8N8U3 RPL21P9-201ENST00000556149 474 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.217-201ENST00000364214 105 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.341-201ENST00000365341 102 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.452-201ENST00000384202 108 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 RNU6-376P-201ENST00000384731 106 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 MIR562-201ENST00000384894 95 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 SNORA12.1-201ENST00000390873 148 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 RNU6-855P-201ENST00000410395 104 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 RPS4XP11-201ENST00000446897 772 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.641-201ENST00000459414 105 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 AC091959.1-201ENST00000495857 238 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 SNORA27.4-201ENST00000516650 95 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 DEFB108E-201ENST00000524692 240 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 AL512310.8-201ENST00000550183 120 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 CYP3A52P-201ENST00000563326 91 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 MIR4503-201ENST00000582187 83 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 AP003357.1-201ENST00000604497 148 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 AC005972.2-201ENST00000604690 348 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 MIR8065-201ENST00000620577 100 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 U6.104-201ENST00000637979 90 ntBASIC1.34□□□□□ -2.19
RTL3Q8N8U3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
RTL3Q8N8U3 AL391987.6-201ENST00000305671 199 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.144-201ENST00000363521 113 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 SNORA72.4-201ENST00000384174 132 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 RNU6-463P-201ENST00000384340 107 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 SNORA26.5-201ENST00000391215 123 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
RTL3Q8N8U3 MIR1302-3-201ENST00000408128 138 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 AC245047.3-201ENST00000429428 127 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 AC104332.1-201ENST00000440471 797 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.33□□□□□ -2.2
RTL3Q8N8U3 SNORD127-201ENST00000458892 86 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 AC021506.2-201ENST00000612354 169 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 MIR8054-201ENST00000620877 86 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 7SK.10-201ENST00000621414 298 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.33□□□□□ -2.2
RTL3Q8N8U3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.33□□□□□ -2.2
RTL3Q8N8U3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RTL3Q8N8U3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RTL3Q8N8U3 SNORA25.1-201ENST00000362326 128 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.275-201ENST00000364726 110 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 RNU6-196P-201ENST00000384315 107 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 RNU2-14P-201ENST00000411053 191 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.637-201ENST00000459424 114 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 RNU7-115P-201ENST00000516433 55 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 RNU7-116P-201ENST00000516940 62 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 SUMO2P16-201ENST00000519475 264 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 AC037487.3-201ENST00000606668 112 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 U2.14-201ENST00000615943 113 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 U4.1-201ENST00000620349 87 ntBASIC1.32□□□□□ -2.2
RTL3Q8N8U3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.14-201ENST00000362415 103 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 SNORA1B-201ENST00000362535 133 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 RNU6-1272P-201ENST00000362776 107 ntBASIC1.31□□□□□ -2.2
RTL3Q8N8U3 Y_RNA.288-201ENST00000364854 92 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms