Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC027119.1-201ENST00000440877 241 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.650-201ENST00000459002 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 RNU6-437P-201ENST00000459408 95 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.777-201ENST00000516982 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 MIR5692C2-201ENST00000577959 77 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 MIR4648-201ENST00000580107 72 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 MIR4282-201ENST00000583613 67 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.771-201ENST00000598668 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.789-201ENST00000622480 102 ntBASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.96□□□□□ -2.1
PPP4R4Q6NUP7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.796-201ENST00000364268 102 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 RNU6-702P-201ENST00000364982 107 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.799-201ENST00000364992 102 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 MIR522-201ENST00000385071 87 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 MIR513A1-201ENST00000385138 129 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 MIR660-201ENST00000385235 97 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 HMGN1P7-201ENST00000491722 313 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 RNA5SP445-201ENST00000515889 115 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 MIR1273D-201ENST00000577266 86 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 AC062037.2-201ENST00000610137 73 ntBASIC1.95□□□□□ -2.1
PPP4R4Q6NUP7 AL139156.1-201ENST00000412785 841 ntBASIC1.94□□□□□ -2.1
PPP4R4Q6NUP7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.94□□□□□ -2.1
PPP4R4Q6NUP7 RPL39P38-201ENST00000467018 153 ntBASIC1.94□□□□□ -2.1
PPP4R4Q6NUP7 AC079140.2-201ENST00000506193 142 ntBASIC1.94□□□□□ -2.1
PPP4R4Q6NUP7 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
PPP4R4Q6NUP7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.94□□□□□ -2.1
PPP4R4Q6NUP7 AC011921.3-201ENST00000605540 361 ntBASIC1.94□□□□□ -2.1
PPP4R4Q6NUP7 MIR7843-201ENST00000622274 79 ntBASIC1.94□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.76-201ENST00000362931 109 ntBASIC1.93□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.122-201ENST00000363331 96 ntBASIC1.93□□□□□ -2.1
PPP4R4Q6NUP7 RNU6-1209P-201ENST00000363655 107 ntBASIC1.93□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.277-201ENST00000364754 102 ntBASIC1.93□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.539-201ENST00000384635 107 ntBASIC1.93□□□□□ -2.1
PPP4R4Q6NUP7 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
PPP4R4Q6NUP7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.93□□□□□ -2.1
PPP4R4Q6NUP7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PPP4R4Q6NUP7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.93□□□□□ -2.1
PPP4R4Q6NUP7 SNORD68-201ENST00000363214 84 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 RNU6-1205P-201ENST00000363625 106 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 AC019129.1-201ENST00000403786 261 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 RNU6-383P-201ENST00000410864 94 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 SNRPGP10-201ENST00000432323 225 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 SNORD11-201ENST00000459124 84 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 snoU13.15-201ENST00000459407 104 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 RNU6-902P-201ENST00000517212 91 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 SUMO2P16-201ENST00000519475 264 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 MIR4778-201ENST00000577635 80 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 AL021707.8-201ENST00000609428 183 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 SNORD3E-202ENST00000627253 216 ntBASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
PPP4R4Q6NUP7 RNU4-10P-201ENST00000364383 140 ntBASIC1.91□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.307-201ENST00000365022 117 ntBASIC1.91□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.350-201ENST00000365409 98 ntBASIC1.91□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.416-201ENST00000384014 113 ntBASIC1.91□□□□□ -2.1
PPP4R4Q6NUP7 Y_RNA.477-201ENST00000384352 108 ntBASIC1.91□□□□□ -2.1
PPP4R4Q6NUP7 SNORD58.1-201ENST00000391313 66 ntBASIC1.91□□□□□ -2.1
PPP4R4Q6NUP7 AC093850.1-201ENST00000454121 251 ntBASIC1.91□□□□□ -2.1
PPP4R4Q6NUP7 MIR3128-201ENST00000581957 66 ntBASIC1.91□□□□□ -2.1
PPP4R4Q6NUP7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
PPP4R4Q6NUP7 RNU6-144P-201ENST00000383951 107 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 AL023284.1-201ENST00000403956 276 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 MIR548H3-201ENST00000408771 118 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 RPL30P13-201ENST00000418873 348 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 RPS27P16-201ENST00000425758 201 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 RNU6-237P-201ENST00000515985 71 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 AC100767.1-201ENST00000528178 123 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 AC120024.3-201ENST00000603167 156 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
PPP4R4Q6NUP7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.20-201ENST00000362479 113 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.60-201ENST00000362831 98 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 SNORD50B-201ENST00000364995 70 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 RNA5SP259-201ENST00000365541 109 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.447-201ENST00000384184 113 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.572-201ENST00000384757 98 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 PIGPP3-201ENST00000425307 415 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 CYCTP-201ENST00000504253 315 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 AC114811.1-201ENST00000507207 168 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 SNORD116-28-201ENST00000516123 91 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.673-201ENST00000516306 88 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 AC004817.2-201ENST00000561794 651 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.89□□□□□ -2.11
PPP4R4Q6NUP7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 RNA5SP432-201ENST00000362480 116 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.54-201ENST00000362766 105 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 RN7SKP101-201ENST00000411376 320 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 AC092991.1-201ENST00000477176 376 ntBASIC1.88□□□□□ -2.11
PPP4R4Q6NUP7 AC019176.1-201ENST00000518519 225 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms