Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 DEFB117-201ENST00000602356 141 ntBASIC0.74□□□□□ -2.29
RAB40BQ12829 AC092447.9-201ENST00000603395 144 ntBASIC0.74□□□□□ -2.29
RAB40BQ12829 AC136443.5-201ENST00000603741 370 ntBASIC0.74□□□□□ -2.29
RAB40BQ12829 AL138825.1-201ENST00000618587 192 ntBASIC0.74□□□□□ -2.29
RAB40BQ12829 RNU6-1115P-201ENST00000362490 106 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 RNA5SP48-201ENST00000363969 126 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 SNORD14E-201ENST00000364009 85 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 Y_RNA.310-201ENST00000365063 113 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 Y_RNA.456-201ENST00000384232 111 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 Y_RNA.462-201ENST00000384268 102 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 AL590004.1-201ENST00000405321 300 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 RNU2-64P-201ENST00000411315 191 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 SNORD19B-201ENST00000459623 84 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 AC091951.2-201ENST00000500762 203 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 RNU7-43P-201ENST00000516554 64 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 RNU6-197P-201ENST00000516680 100 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 RNU7-110P-201ENST00000516891 62 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.73□□□□□ -2.29
RAB40BQ12829 RPS29P30-201ENST00000600975 111 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 AC011373.1-201ENST00000607270 237 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 AC104985.2-201ENST00000620598 500 ntBASIC0.73□□□□□ -2.29
RAB40BQ12829 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
RAB40BQ12829 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.72□□□□□ -2.29
RAB40BQ12829 Y_RNA.191-201ENST00000363972 113 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 Y_RNA.238-201ENST00000364441 102 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 Y_RNA.496-201ENST00000384444 101 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 AL160004.2-201ENST00000432935 350 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 FABP5P4-201ENST00000437203 171 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.72□□□□□ -2.29
RAB40BQ12829 SNORD123-201ENST00000459473 70 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 AC023827.1-201ENST00000569247 97 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 MIR5188-201ENST00000583467 113 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 JPX_2.1-201ENST00000614161 69 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 SEPT14P17-201ENST00000617978 177 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 AC091925.1-201ENST00000623204 462 ntBASIC0.72□□□□□ -2.29
RAB40BQ12829 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
RAB40BQ12829 SNORD114-27-201ENST00000363766 70 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 Y_RNA.203-201ENST00000364106 102 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 Y_RNA.368-201ENST00000365547 113 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 Y_RNA.458-201ENST00000384240 102 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 MIR1185-1-201ENST00000408598 86 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 MTND1P14-201ENST00000427400 950 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 RPL23AP54-201ENST00000495129 419 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 FGF7P4-201ENST00000509595 295 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 RNA5SP255-201ENST00000516370 107 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 AP003716.2-201ENST00000528260 108 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 AC024405.2-202ENST00000532731 184 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 AP003357.1-201ENST00000604497 148 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 AL121655.1-201ENST00000605811 308 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 AC007742.2-201ENST00000618226 398 ntBASIC0.71□□□□□ -2.3
RAB40BQ12829 MIR96-201ENST00000362288 78 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 SNORD81.1-201ENST00000363064 77 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 RNU1-93P-201ENST00000364704 169 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 Y_RNA.356-201ENST00000365475 113 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 RNU6-21P-201ENST00000384710 107 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 MIR802-201ENST00000390235 94 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 AC236972.2-201ENST00000434979 310 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 AC117454.1-201ENST00000491120 168 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 RNU6-875P-201ENST00000516488 106 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 SNORA40.14-201ENST00000516543 86 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 RNU4-77P-201ENST00000516692 156 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 MIR4452-201ENST00000583004 71 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 AC131055.1-201ENST00000584626 316 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 AL606534.2-204ENST00000635008 178 ntBASIC0.7□□□□□ -2.3
RAB40BQ12829 Y_RNA.303-201ENST00000364998 94 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 RNU1-115P-201ENST00000365329 160 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 Y_RNA.439-201ENST00000384119 94 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 SNORD38C-201ENST00000384381 69 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 Y_RNA.529-201ENST00000384586 119 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 RNU6-1009P-201ENST00000390996 107 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 RNU4-30P-201ENST00000410245 143 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 AF228730.4-201ENST00000421457 183 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 RN7SKP164-201ENST00000516138 266 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 AC093027.1-201ENST00000546698 429 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 AC127455.1-201ENST00000565496 145 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 MIR3145-201ENST00000580727 82 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 MIR548AY-201ENST00000617669 107 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
RAB40BQ12829 Y_RNA.226-201ENST00000364337 114 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 Y_RNA.252-201ENST00000364556 101 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 U8.7-201ENST00000364940 136 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 SNORD114-22-201ENST00000365423 72 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 Y_RNA.526-201ENST00000384572 110 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 Y_RNA.551-201ENST00000384661 102 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.68□□□□□ -2.3
RAB40BQ12829 RNU6-976P-201ENST00000516086 111 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 RNU7-115P-201ENST00000516433 55 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 Y_RNA.713-201ENST00000517013 96 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 AC109810.1-201ENST00000534066 224 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 AC087685.1-201ENST00000587507 141 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 AC008133.2-201ENST00000624540 351 ntBASIC0.68□□□□□ -2.3
RAB40BQ12829 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
RAB40BQ12829 AC134026.1-201ENST00000623249 2239 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms