Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNORD58B-201ENST00000607313 66 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 AL391903.3-201ENST00000612158 163 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 AC010205.1-201ENST00000616668 449 ntBASIC0.73□□□□□ -2.29
HMGCS1Q01581 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.73□□□□□ -2.29
HMGCS1Q01581 RNU6-1084P-201ENST00000362498 107 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 Y_RNA.70-201ENST00000362886 110 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 SNORD50B-201ENST00000364995 70 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 Y_RNA.331-201ENST00000365267 102 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 SNORA72-201ENST00000384339 132 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 SNORA80D-201ENST00000384488 135 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 MIR1287-201ENST00000408492 90 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC005042.3-201ENST00000453230 174 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC245047.8-201ENST00000456455 284 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 RNU7-21P-201ENST00000459430 62 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 RPS29P1-201ENST00000465274 159 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC010655.3-201ENST00000478818 450 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC022616.4-201ENST00000522985 181 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 RBM11P1-201ENST00000604951 799 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC108706.1-201ENST00000611053 297 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 AC106800.4-201ENST00000614905 153 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
HMGCS1Q01581 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HMGCS1Q01581 SNORA25.3-201ENST00000363205 127 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 Y_RNA.263-201ENST00000364659 114 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 Y_RNA.310-201ENST00000365063 113 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 Y_RNA.315-201ENST00000365117 102 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 Y_RNA.341-201ENST00000365341 102 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 RNU6-1009P-201ENST00000390996 107 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 RNU4-30P-201ENST00000410245 143 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 SNRPGP10-201ENST00000432323 225 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 AL160004.2-201ENST00000432935 350 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGCS1Q01581 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGCS1Q01581 RNU7-41P-201ENST00000515917 61 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 SNORA18.7-201ENST00000516910 131 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGCS1Q01581 MIR3145-201ENST00000580727 82 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.71□□□□□ -2.3
HMGCS1Q01581 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 Y_RNA.224-201ENST00000364308 111 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 Y_RNA.252-201ENST00000364556 101 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 SNORD114-24-201ENST00000365029 72 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 AC117470.1-201ENST00000381974 330 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNU6-937P-201ENST00000384325 106 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 MIR136-201ENST00000385207 82 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNU6-131P-201ENST00000391144 107 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNA5SP247-201ENST00000411181 105 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNU2-64P-201ENST00000411315 191 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 RNU7-110P-201ENST00000516891 62 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 SNORA74.3-201ENST00000517108 154 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 POLR3GP1-201ENST00000594073 261 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 Y_RNA.772-201ENST00000606692 102 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 AL606534.2-204ENST00000635008 178 ntBASIC0.7□□□□□ -2.3
HMGCS1Q01581 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.39-201ENST00000362620 98 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RNA5SP264-201ENST00000363115 107 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.143-201ENST00000363520 106 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 U8.7-201ENST00000364940 136 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.368-201ENST00000365547 113 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RNU6-1323P-201ENST00000384025 107 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.462-201ENST00000384268 102 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RNY3P14-201ENST00000384309 102 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.579-201ENST00000390939 94 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RNU6-710P-201ENST00000410424 105 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 MTND5P20-201ENST00000448677 143 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 MIR548S-201ENST00000581352 82 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 RPS29P30-201ENST00000600975 111 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 AC011373.1-201ENST00000607270 237 ntBASIC0.69□□□□□ -2.3
HMGCS1Q01581 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
HMGCS1Q01581 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.69□□□□□ -2.3
HMGCS1Q01581 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HMGCS1Q01581 Y_RNA.813-201ENST00000364639 102 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 snoU2-30.1-201ENST00000365012 70 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNU1-115P-201ENST00000365329 160 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNY1P14-201ENST00000384426 108 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 MIR520C-201ENST00000385005 87 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 AC236972.2-201ENST00000434979 310 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNU7-90P-201ENST00000459216 62 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 SNORA40.14-201ENST00000516543 86 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNU6-197P-201ENST00000516680 100 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 Y_RNA.702-201ENST00000516843 96 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 AP003716.2-201ENST00000528260 108 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 AC024405.2-202ENST00000532731 184 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 MIR4764-201ENST00000580680 88 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 MIR4801-201ENST00000582704 82 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 AL121655.1-201ENST00000605811 308 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 MIR6788-201ENST00000618842 66 ntBASIC0.68□□□□□ -2.3
HMGCS1Q01581 RNU4-73P-201ENST00000363164 141 ntBASIC0.67□□□□□ -2.3
HMGCS1Q01581 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
HMGCS1Q01581 Y_RNA.456-201ENST00000384232 111 ntBASIC0.67□□□□□ -2.3
HMGCS1Q01581 Y_RNA.551-201ENST00000384661 102 ntBASIC0.67□□□□□ -2.3
HMGCS1Q01581 MIR942-201ENST00000401111 86 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 254.3 ms