Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
AIF1P55008 RBM11P1-201ENST00000604951 799 ntBASIC0.38□□□□□ -2.35
AIF1P55008 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
AIF1P55008 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
AIF1P55008 Y_RNA.88-201ENST00000363029 99 ntBASIC0.37□□□□□ -2.35
AIF1P55008 Y_RNA.148-201ENST00000363557 117 ntBASIC0.37□□□□□ -2.35
AIF1P55008 RNU6-396P-201ENST00000365369 105 ntBASIC0.37□□□□□ -2.35
AIF1P55008 RNU6-926P-201ENST00000384075 107 ntBASIC0.37□□□□□ -2.35
AIF1P55008 Y_RNA.436-201ENST00000384097 102 ntBASIC0.37□□□□□ -2.35
AIF1P55008 Y_RNA.577-201ENST00000384794 101 ntBASIC0.37□□□□□ -2.35
AIF1P55008 SNORD115-47-201ENST00000391226 86 ntBASIC0.37□□□□□ -2.35
AIF1P55008 MIR936-201ENST00000401264 98 ntBASIC0.37□□□□□ -2.35
AIF1P55008 RNU6-1199P-201ENST00000411249 104 ntBASIC0.37□□□□□ -2.35
AIF1P55008 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.37□□□□□ -2.35
AIF1P55008 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
AIF1P55008 Y_RNA.3-201ENST00000362331 103 ntBASIC0.36□□□□□ -2.35
AIF1P55008 RNU6-1323P-201ENST00000384025 107 ntBASIC0.36□□□□□ -2.35
AIF1P55008 Y_RNA.446-201ENST00000384178 104 ntBASIC0.36□□□□□ -2.35
AIF1P55008 MIR140-201ENST00000385282 100 ntBASIC0.36□□□□□ -2.35
AIF1P55008 RNU6-710P-201ENST00000410424 105 ntBASIC0.36□□□□□ -2.35
AIF1P55008 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.36□□□□□ -2.35
AIF1P55008 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.36□□□□□ -2.35
AIF1P55008 RNU6-155P-201ENST00000516347 100 ntBASIC0.36□□□□□ -2.35
AIF1P55008 RNU6-830P-201ENST00000516353 107 ntBASIC0.36□□□□□ -2.35
AIF1P55008 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.36□□□□□ -2.35
AIF1P55008 AC087685.1-201ENST00000587507 141 ntBASIC0.36□□□□□ -2.35
AIF1P55008 AC060780.3-201ENST00000589464 80 ntBASIC0.36□□□□□ -2.35
AIF1P55008 AC090517.2-201ENST00000614966 680 ntBASIC0.36□□□□□ -2.35
AIF1P55008 AC087588.2-201ENST00000617667 426 ntBASIC0.36□□□□□ -2.35
AIF1P55008 MIR6734-201ENST00000621166 68 ntBASIC0.36□□□□□ -2.35
AIF1P55008 RNU6-626P-201ENST00000363354 107 ntBASIC0.35□□□□□ -2.35
AIF1P55008 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
AIF1P55008 RNU6-20P-201ENST00000384106 107 ntBASIC0.35□□□□□ -2.35
AIF1P55008 RNY3P4-201ENST00000384428 101 ntBASIC0.35□□□□□ -2.35
AIF1P55008 SNORD28B-201ENST00000390993 75 ntBASIC0.35□□□□□ -2.35
AIF1P55008 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.35□□□□□ -2.35
AIF1P55008 AC092989.1-201ENST00000481235 277 ntBASIC0.35□□□□□ -2.35
AIF1P55008 AC093534.1-201ENST00000504977 132 ntBASIC0.35□□□□□ -2.35
AIF1P55008 PRDX4P1-201ENST00000507189 574 ntBASIC0.35□□□□□ -2.35
AIF1P55008 RNU7-116P-201ENST00000516940 62 ntBASIC0.35□□□□□ -2.35
AIF1P55008 AL589743.1-201ENST00000551932 2712 ntBASIC0.35□□□□□ -2.35
AIF1P55008 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
AIF1P55008 Y_RNA.376-201ENST00000365638 108 ntBASIC0.34□□□□□ -2.36
AIF1P55008 RNA5SP95-201ENST00000410319 137 ntBASIC0.34□□□□□ -2.36
AIF1P55008 RNA5SP193-201ENST00000410353 107 ntBASIC0.34□□□□□ -2.36
AIF1P55008 RNU6-1156P-201ENST00000410365 100 ntBASIC0.34□□□□□ -2.36
AIF1P55008 RNU6-264P-201ENST00000517134 104 ntBASIC0.34□□□□□ -2.36
AIF1P55008 Pinc.1-201ENST00000616452 154 ntBASIC0.34□□□□□ -2.36
AIF1P55008 AC002553.4-201ENST00000616896 331 ntBASIC0.34□□□□□ -2.36
AIF1P55008 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
AIF1P55008 Y_RNA.230-201ENST00000364348 109 ntBASIC0.33□□□□□ -2.36
AIF1P55008 RNU4-45P-201ENST00000365469 141 ntBASIC0.33□□□□□ -2.36
AIF1P55008 RNU6-442P-201ENST00000383968 104 ntBASIC0.33□□□□□ -2.36
AIF1P55008 RNU6-342P-201ENST00000384521 104 ntBASIC0.33□□□□□ -2.36
AIF1P55008 MIR573-201ENST00000384964 99 ntBASIC0.33□□□□□ -2.36
AIF1P55008 SNORD78.2-201ENST00000391076 69 ntBASIC0.33□□□□□ -2.36
AIF1P55008 MIR1277-201ENST00000408536 78 ntBASIC0.33□□□□□ -2.36
AIF1P55008 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
AIF1P55008 RNU6-1132P-201ENST00000459214 107 ntBASIC0.33□□□□□ -2.36
AIF1P55008 RNU7-4P-201ENST00000516961 62 ntBASIC0.33□□□□□ -2.36
AIF1P55008 AC144568.1-201ENST00000520139 137 ntBASIC0.33□□□□□ -2.36
AIF1P55008 AC012433.1-201ENST00000588916 398 ntBASIC0.33□□□□□ -2.36
AIF1P55008 AC080013.6-201ENST00000606185 215 ntBASIC0.33□□□□□ -2.36
AIF1P55008 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.33□□□□□ -2.36
AIF1P55008 MIR377-201ENST00000362145 69 ntBASIC0.32□□□□□ -2.36
AIF1P55008 Y_RNA.146-201ENST00000363549 102 ntBASIC0.32□□□□□ -2.36
AIF1P55008 Y_RNA.516-201ENST00000384541 124 ntBASIC0.32□□□□□ -2.36
AIF1P55008 MT-TN-201ENST00000387400 73 ntBASIC0.32□□□□□ -2.36
AIF1P55008 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
AIF1P55008 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
AIF1P55008 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
AIF1P55008 AC015726.2-201ENST00000620112 122 ntBASIC0.32□□□□□ -2.36
AIF1P55008 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
AIF1P55008 Y_RNA.203-201ENST00000364106 102 ntBASIC0.31□□□□□ -2.36
AIF1P55008 RNU6-580P-201ENST00000365159 107 ntBASIC0.31□□□□□ -2.36
AIF1P55008 Y_RNA.537-201ENST00000384626 109 ntBASIC0.31□□□□□ -2.36
AIF1P55008 U8.17-201ENST00000391292 132 ntBASIC0.31□□□□□ -2.36
AIF1P55008 MCFD2P1-201ENST00000417812 300 ntBASIC0.31□□□□□ -2.36
AIF1P55008 AC016907.1-201ENST00000419483 435 ntBASIC0.31□□□□□ -2.36
AIF1P55008 MTCO2P27-201ENST00000420740 428 ntBASIC0.31□□□□□ -2.36
AIF1P55008 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.31□□□□□ -2.36
AIF1P55008 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.31□□□□□ -2.36
AIF1P55008 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.31□□□□□ -2.36
AIF1P55008 AC011712.1-201ENST00000588959 234 ntBASIC0.31□□□□□ -2.36
AIF1P55008 POLR3GP1-201ENST00000594073 261 ntBASIC0.31□□□□□ -2.36
AIF1P55008 AC022441.3-201ENST00000605737 136 ntBASIC0.31□□□□□ -2.36
AIF1P55008 JPX_2.1-201ENST00000614161 69 ntBASIC0.31□□□□□ -2.36
AIF1P55008 AL669831.3-213ENST00000636676 183 ntBASIC0.31□□□□□ -2.36
AIF1P55008 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
AIF1P55008 RNU6-369P-201ENST00000362515 102 ntBASIC0.3□□□□□ -2.36
AIF1P55008 Y_RNA.72-201ENST00000362894 103 ntBASIC0.3□□□□□ -2.36
AIF1P55008 RNY1P8-201ENST00000383970 114 ntBASIC0.3□□□□□ -2.36
AIF1P55008 SNORA51.10-201ENST00000384418 136 ntBASIC0.3□□□□□ -2.36
AIF1P55008 MIR216A-201ENST00000385063 110 ntBASIC0.3□□□□□ -2.36
AIF1P55008 MIR802-201ENST00000390235 94 ntBASIC0.3□□□□□ -2.36
AIF1P55008 RNU6-855P-201ENST00000410395 104 ntBASIC0.3□□□□□ -2.36
AIF1P55008 MTND1P2-201ENST00000430604 821 ntBASIC0.3□□□□□ -2.36
AIF1P55008 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.3□□□□□ -2.36
AIF1P55008 Y_RNA.329-201ENST00000365209 107 ntBASIC0.29□□□□□ -2.36
AIF1P55008 SNRPGP14-201ENST00000435400 219 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms