Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 RN7SL499P-201ENST00000481141 276 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 RN7SL297P-201ENST00000483161 293 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 RNU6-237P-201ENST00000515985 71 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 RNA5SP24-201ENST00000516478 95 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 Y_RNA.692-201ENST00000516627 105 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 RNU1-104P-201ENST00000517280 175 ntBASIC2.59□□□□□ -1.99
SLC6A11P48066 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.58□□□□□ -2
SLC6A11P48066 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SLC6A11P48066 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.58□□□□□ -2
SLC6A11P48066 SNORA1B-201ENST00000362535 133 ntBASIC2.58□□□□□ -2
SLC6A11P48066 RNA5SP493-201ENST00000364115 91 ntBASIC2.58□□□□□ -2
SLC6A11P48066 RNU1-91P-201ENST00000364746 163 ntBASIC2.58□□□□□ -2
SLC6A11P48066 SNORA70B-201ENST00000384210 135 ntBASIC2.58□□□□□ -2
SLC6A11P48066 MIR515-2-201ENST00000384883 83 ntBASIC2.58□□□□□ -2
SLC6A11P48066 MIR515-1-201ENST00000384884 83 ntBASIC2.58□□□□□ -2
SLC6A11P48066 MIR802-201ENST00000390235 94 ntBASIC2.58□□□□□ -2
SLC6A11P48066 RNA5SP210-201ENST00000391034 120 ntBASIC2.58□□□□□ -2
SLC6A11P48066 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
SLC6A11P48066 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.58□□□□□ -2
SLC6A11P48066 AL163195.1-201ENST00000496941 348 ntBASIC2.58□□□□□ -2
SLC6A11P48066 RNU6-659P-201ENST00000516454 104 ntBASIC2.58□□□□□ -2
SLC6A11P48066 RNU6-1270P-201ENST00000517128 108 ntBASIC2.58□□□□□ -2
SLC6A11P48066 AC090049.2-201ENST00000550377 109 ntBASIC2.58□□□□□ -2
SLC6A11P48066 AC026271.5-201ENST00000577873 130 ntBASIC2.58□□□□□ -2
SLC6A11P48066 AL591926.4-201ENST00000616895 298 ntBASIC2.58□□□□□ -2
SLC6A11P48066 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SLC6A11P48066 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.58□□□□□ -2
SLC6A11P48066 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC6A11P48066 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SLC6A11P48066 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
SLC6A11P48066 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.57□□□□□ -2
SLC6A11P48066 Y_RNA.120-201ENST00000363304 110 ntBASIC2.57□□□□□ -2
SLC6A11P48066 SNORA3.2-201ENST00000408221 125 ntBASIC2.57□□□□□ -2
SLC6A11P48066 CST2P1-201ENST00000425770 87 ntBASIC2.57□□□□□ -2
SLC6A11P48066 RPL39P40-201ENST00000445481 146 ntBASIC2.57□□□□□ -2
SLC6A11P48066 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.57□□□□□ -2
SLC6A11P48066 RNU7-94P-201ENST00000459576 63 ntBASIC2.57□□□□□ -2
SLC6A11P48066 AL049830.1-201ENST00000468034 425 ntBASIC2.57□□□□□ -2
SLC6A11P48066 RN7SKP179-201ENST00000516126 217 ntBASIC2.57□□□□□ -2
SLC6A11P48066 RNU6-504P-201ENST00000516568 104 ntBASIC2.57□□□□□ -2
SLC6A11P48066 AC007751.1-201ENST00000529260 376 ntBASIC2.57□□□□□ -2
SLC6A11P48066 MIR3129-201ENST00000581095 76 ntBASIC2.57□□□□□ -2
SLC6A11P48066 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.57□□□□□ -2
SLC6A11P48066 ICE2P2-201ENST00000483823 2787 ntBASIC2.57□□□□□ -2
SLC6A11P48066 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SLC6A11P48066 Y_RNA.66-201ENST00000362862 102 ntBASIC2.56□□□□□ -2
SLC6A11P48066 SNORD68-201ENST00000363214 84 ntBASIC2.56□□□□□ -2
SLC6A11P48066 RNA5SP127-201ENST00000411051 133 ntBASIC2.56□□□□□ -2
SLC6A11P48066 Z98742.3-201ENST00000418637 326 ntBASIC2.56□□□□□ -2
SLC6A11P48066 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.56□□□□□ -2
SLC6A11P48066 RPS26P45-201ENST00000471748 340 ntBASIC2.56□□□□□ -2
SLC6A11P48066 Y_RNA.690-201ENST00000516603 95 ntBASIC2.56□□□□□ -2
SLC6A11P48066 Y_RNA.714-201ENST00000517065 90 ntBASIC2.56□□□□□ -2
SLC6A11P48066 AC024995.1-201ENST00000523014 93 ntBASIC2.56□□□□□ -2
SLC6A11P48066 AP002004.2-201ENST00000531656 154 ntBASIC2.56□□□□□ -2
SLC6A11P48066 AC008507.4-201ENST00000585464 127 ntBASIC2.56□□□□□ -2
SLC6A11P48066 AC022202.1-201ENST00000613515 211 ntBASIC2.56□□□□□ -2
SLC6A11P48066 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.56□□□□□ -2
SLC6A11P48066 RNU6-215P-201ENST00000365169 102 ntBASIC2.55□□□□□ -2
SLC6A11P48066 RNU4-53P-201ENST00000410828 140 ntBASIC2.55□□□□□ -2
SLC6A11P48066 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.55□□□□□ -2
SLC6A11P48066 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.55□□□□□ -2
SLC6A11P48066 AL358944.1-201ENST00000528537 144 ntBASIC2.55□□□□□ -2
SLC6A11P48066 AL391516.1-201ENST00000554380 2449 ntBASIC2.55□□□□□ -2
SLC6A11P48066 MIR3169-201ENST00000578032 83 ntBASIC2.55□□□□□ -2
SLC6A11P48066 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.55□□□□□ -2
SLC6A11P48066 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLC6A11P48066 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.55□□□□□ -2
SLC6A11P48066 ZNF658B-202ENST00000615961 3375 ntBASIC2.55□□□□□ -2
SLC6A11P48066 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLC6A11P48066 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.54□□□□□ -2
SLC6A11P48066 Y_RNA.52-201ENST00000362760 96 ntBASIC2.54□□□□□ -2
SLC6A11P48066 U8.2-201ENST00000363156 134 ntBASIC2.54□□□□□ -2
SLC6A11P48066 RNU6-1164P-201ENST00000364428 107 ntBASIC2.54□□□□□ -2
SLC6A11P48066 RNU6-1325P-201ENST00000364905 105 ntBASIC2.54□□□□□ -2
SLC6A11P48066 RNU1-109P-201ENST00000383960 147 ntBASIC2.54□□□□□ -2
SLC6A11P48066 SNORA1-201ENST00000384107 130 ntBASIC2.54□□□□□ -2
SLC6A11P48066 RNU6-772P-201ENST00000516042 105 ntBASIC2.54□□□□□ -2
SLC6A11P48066 Y_RNA.666-201ENST00000516187 112 ntBASIC2.54□□□□□ -2
SLC6A11P48066 AL365205.2-201ENST00000594586 68 ntBASIC2.54□□□□□ -2
SLC6A11P48066 MIR7843-201ENST00000622274 79 ntBASIC2.54□□□□□ -2
SLC6A11P48066 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SLC6A11P48066 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
SLC6A11P48066 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.54□□□□□ -2
SLC6A11P48066 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.53□□□□□ -2
SLC6A11P48066 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
SLC6A11P48066 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC6A11P48066 Y_RNA.114-201ENST00000363265 113 ntBASIC2.53□□□□□ -2
SLC6A11P48066 RNU6-1056P-201ENST00000383996 107 ntBASIC2.53□□□□□ -2
SLC6A11P48066 RNU6-44P-201ENST00000384045 107 ntBASIC2.53□□□□□ -2
SLC6A11P48066 SNORD61-201ENST00000384252 73 ntBASIC2.53□□□□□ -2
SLC6A11P48066 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
SLC6A11P48066 AL158823.1-201ENST00000418441 478 ntBASIC2.53□□□□□ -2
SLC6A11P48066 AL035461.1-201ENST00000421490 332 ntBASIC2.53□□□□□ -2
SLC6A11P48066 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.53□□□□□ -2
SLC6A11P48066 AC099677.2-201ENST00000436385 175 ntBASIC2.53□□□□□ -2
SLC6A11P48066 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.53□□□□□ -2
SLC6A11P48066 RNU6-1061P-201ENST00000516530 99 ntBASIC2.53□□□□□ -2
SLC6A11P48066 AC133485.4-201ENST00000561835 220 ntBASIC2.53□□□□□ -2
SLC6A11P48066 AC138907.4-201ENST00000570107 226 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms