Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 RPL17P19-201ENST00000489069 552 ntBASIC0.27□□□□□ -2.37
OPN1SWP03999 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
OPN1SWP03999 RN7SKP12-201ENST00000516275 143 ntBASIC0.27□□□□□ -2.37
OPN1SWP03999 SNORA62.5-201ENST00000516634 120 ntBASIC0.27□□□□□ -2.37
OPN1SWP03999 MIR548AR-201ENST00000582191 57 ntBASIC0.27□□□□□ -2.37
OPN1SWP03999 AC005972.2-201ENST00000604690 348 ntBASIC0.27□□□□□ -2.37
OPN1SWP03999 AC008133.2-201ENST00000624540 351 ntBASIC0.27□□□□□ -2.37
OPN1SWP03999 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.27□□□□□ -2.37
OPN1SWP03999 Y_RNA.86-201ENST00000363020 111 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 RNU4-24P-201ENST00000364565 139 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 RNU6-593P-201ENST00000364716 112 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 SNORD115-47-201ENST00000391226 86 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 RNU2-54P-201ENST00000410299 190 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 MTCO2P27-201ENST00000420740 428 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 MRPS18CP6-201ENST00000423587 223 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 AL358176.2-201ENST00000425769 204 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 MTND1P4-201ENST00000435196 415 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 HMGN2P32-201ENST00000444648 269 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 AC105313.1-201ENST00000509121 353 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 RNU6-1012P-201ENST00000516606 109 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 AC022616.4-201ENST00000522985 181 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.26□□□□□ -2.37
OPN1SWP03999 PISRT1.1-201ENST00000616930 107 ntBASIC0.26□□□□□ -2.37
OPN1SWP03999 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.26□□□□□ -2.37
OPN1SWP03999 RNU6-510P-201ENST00000391239 108 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 RNU2-61P-201ENST00000411069 191 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 AC016907.1-201ENST00000419483 435 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 MTND4P28-201ENST00000426217 387 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 CHEK2P4-201ENST00000450340 246 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 AC107399.1-201ENST00000451226 265 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 RPL30P15-201ENST00000457129 321 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.25□□□□□ -2.37
OPN1SWP03999 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.25□□□□□ -2.37
OPN1SWP03999 SNORA68.3-201ENST00000515906 83 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 RNU6-120P-201ENST00000516077 103 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 RNU6-1213P-201ENST00000517075 94 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 RNA5SP330-201ENST00000517096 96 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 MIR2355-201ENST00000517199 87 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 AC104695.3-201ENST00000604052 296 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 AL355073.2-201ENST00000612106 557 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 AC240442.1-201ENST00000616055 283 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 MIR3688-2-201ENST00000636963 87 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 MIR924-201ENST00000638017 53 ntBASIC0.25□□□□□ -2.37
OPN1SWP03999 MIR330-201ENST00000362196 94 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 Y_RNA.258-201ENST00000364613 105 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 Y_RNA.339-201ENST00000365325 102 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 Y_RNA.436-201ENST00000384097 102 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 RNU6-767P-201ENST00000384132 107 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 SNORA72-201ENST00000384339 132 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 Y_RNA.482-201ENST00000384377 111 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 MIR140-201ENST00000385282 100 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 SNORA75.4-201ENST00000391278 119 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 RNU6-1199P-201ENST00000411249 104 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.24□□□□□ -2.37
OPN1SWP03999 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.24□□□□□ -2.37
OPN1SWP03999 AC011352.1-201ENST00000512300 793 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.24□□□□□ -2.37
OPN1SWP03999 RNU6-436P-201ENST00000516171 114 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 RNU6-155P-201ENST00000516347 100 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 RNU6-966P-201ENST00000516479 104 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.24□□□□□ -2.37
OPN1SWP03999 MIR4514-201ENST00000581410 57 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 AC005899.2-201ENST00000584353 90 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 AC005176.2-201ENST00000596933 147 ntBASIC0.24□□□□□ -2.37
OPN1SWP03999 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
OPN1SWP03999 Y_RNA.3-201ENST00000362331 103 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 Y_RNA.88-201ENST00000363029 99 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 RNU6-626P-201ENST00000363354 107 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 SNORD14E-201ENST00000364009 85 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 RNU6-716P-201ENST00000365621 103 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 RNU6-20P-201ENST00000384106 107 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 Y_RNA.446-201ENST00000384178 104 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 SNORA69.1-201ENST00000390904 137 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 RNU6-613P-201ENST00000410412 108 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 MTND3P8-201ENST00000412909 339 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 snoU13.21-201ENST00000459368 105 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 MIR2115-201ENST00000516657 100 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 Y_RNA.714-201ENST00000517065 90 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 AL355375.2-201ENST00000574825 175 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 AC011476.5-201ENST00000615594 130 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 AC087588.2-201ENST00000617667 426 ntBASIC0.23□□□□□ -2.37
OPN1SWP03999 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
OPN1SWP03999 RNU6-396P-201ENST00000365369 105 ntBASIC0.22□□□□□ -2.37
OPN1SWP03999 SNORD38C-201ENST00000384381 69 ntBASIC0.22□□□□□ -2.37
OPN1SWP03999 RNU6-192P-201ENST00000391253 100 ntBASIC0.22□□□□□ -2.37
OPN1SWP03999 Y_RNA.592-201ENST00000410274 109 ntBASIC0.22□□□□□ -2.37
OPN1SWP03999 RNU6-177P-201ENST00000411257 104 ntBASIC0.22□□□□□ -2.37
OPN1SWP03999 NDUFA4P2-201ENST00000489989 244 ntBASIC0.22□□□□□ -2.37
OPN1SWP03999 RNU6-718P-201ENST00000516166 105 ntBASIC0.22□□□□□ -2.37
OPN1SWP03999 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.22□□□□□ -2.37
OPN1SWP03999 RNU6-307P-201ENST00000516743 106 ntBASIC0.22□□□□□ -2.37
OPN1SWP03999 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.21□□□□□ -2.38
OPN1SWP03999 RNU6-369P-201ENST00000362515 102 ntBASIC0.21□□□□□ -2.38
OPN1SWP03999 Y_RNA.168-201ENST00000363740 102 ntBASIC0.21□□□□□ -2.38
OPN1SWP03999 RNY3P11-201ENST00000364153 102 ntBASIC0.21□□□□□ -2.38
OPN1SWP03999 Y_RNA.329-201ENST00000365209 107 ntBASIC0.21□□□□□ -2.38
OPN1SWP03999 Y_RNA.516-201ENST00000384541 124 ntBASIC0.21□□□□□ -2.38
OPN1SWP03999 MIR625-201ENST00000385047 85 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 242 ms