Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SNORA67.5-201ENST00000391036 107 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 RNA5SP323-201ENST00000391094 133 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 HSPE1P13-201ENST00000451143 297 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 SUMO1P2-201ENST00000452524 304 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 AC091021.1-201ENST00000468051 388 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 RNU7-99P-201ENST00000516271 62 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 SNORA31.10-201ENST00000516482 106 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 SNORA27.4-201ENST00000516650 95 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 RNU6-1271P-201ENST00000517049 105 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 RNU6-111P-201ENST00000517179 105 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 RNU6-902P-201ENST00000517212 91 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 AL512605.2-201ENST00000592972 256 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 AC006006.1-201ENST00000603082 144 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.26□□□□□ -2.21
HDAC3O15379 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.26□□□□□ -2.21
HDAC3O15379 snoU18.1-201ENST00000629629 71 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HDAC3O15379 UBE2WP1-201ENST00000362030 340 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 RNU6-379P-201ENST00000363813 104 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 Y_RNA.188-201ENST00000363952 111 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 U8.7-201ENST00000364940 136 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 Y_RNA.352-201ENST00000365439 102 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 Y_RNA.401-201ENST00000383965 117 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 RNU6-514P-201ENST00000384208 107 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 MIR515-2-201ENST00000384883 83 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 MIR515-1-201ENST00000384884 83 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HDAC3O15379 RNU4-62P-201ENST00000410125 130 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 BTF3P11-201ENST00000426582 477 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 AC104332.1-201ENST00000440471 797 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 RNU1-123P-201ENST00000458950 160 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 SNORA70.12-201ENST00000516084 153 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 SNORD116-28-201ENST00000516123 91 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 RNU1-142P-201ENST00000516682 145 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 AC136628.3-201ENST00000521868 290 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 AC024995.1-201ENST00000523014 93 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 AC091178.2-201ENST00000584401 117 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 AP000942.3-201ENST00000603702 160 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 AC068647.2-201ENST00000637380 353 ntBASIC1.25□□□□□ -2.21
HDAC3O15379 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HDAC3O15379 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.24□□□□□ -2.21
HDAC3O15379 Y_RNA.20-201ENST00000362479 113 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 Y_RNA.269-201ENST00000364685 89 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 SNORA25.8-201ENST00000364831 128 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 SNORA72.4-201ENST00000384174 132 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 Y_RNA.456-201ENST00000384232 111 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 RNU6-376P-201ENST00000384731 106 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 MIR520A-201ENST00000384862 85 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 AC010154.1-201ENST00000425857 269 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 AL162725.1-201ENST00000435405 301 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 RPS4XP11-201ENST00000446897 772 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 RNU7-141P-201ENST00000459304 62 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 AC117454.1-201ENST00000491120 168 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.24□□□□□ -2.21
HDAC3O15379 RN7SKP179-201ENST00000516126 217 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 RNU6-1023P-201ENST00000516137 106 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 RNA5SP458-201ENST00000516188 119 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 RNU6-1291P-201ENST00000516591 104 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 RNU6-388P-201ENST00000517012 105 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 RNU6-389P-201ENST00000517048 105 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 AC090821.2-201ENST00000523552 176 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 AC011921.3-201ENST00000605540 361 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 AC037487.3-201ENST00000606668 112 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 AC078938.1-201ENST00000620993 318 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 MIR6079-201ENST00000635807 62 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 AC018630.2-201ENST00000534866 2403 ntBASIC1.24□□□□□ -2.21
HDAC3O15379 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HDAC3O15379 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HDAC3O15379 Y_RNA.65-201ENST00000362846 100 ntBASIC1.23□□□□□ -2.21
HDAC3O15379 Y_RNA.122-201ENST00000363331 96 ntBASIC1.23□□□□□ -2.21
HDAC3O15379 RNU4-10P-201ENST00000364383 140 ntBASIC1.23□□□□□ -2.21
HDAC3O15379 RNU6-211P-201ENST00000384047 107 ntBASIC1.23□□□□□ -2.21
HDAC3O15379 MTCO2P33-201ENST00000402100 465 ntBASIC1.23□□□□□ -2.21
HDAC3O15379 MIR548H3-201ENST00000408771 118 ntBASIC1.23□□□□□ -2.21
HDAC3O15379 RNU6-710P-201ENST00000410424 105 ntBASIC1.23□□□□□ -2.21
HDAC3O15379 MIR4282-201ENST00000583613 67 ntBASIC1.23□□□□□ -2.21
HDAC3O15379 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.23□□□□□ -2.21
HDAC3O15379 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
HDAC3O15379 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HDAC3O15379 MT-TG-201ENST00000387429 68 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 SNORD58.1-201ENST00000391313 66 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 Y_RNA.618-201ENST00000410949 107 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 AC024067.1-201ENST00000426199 223 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 AC245047.3-201ENST00000429428 127 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 SNORD2.1-201ENST00000458762 69 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 RNU6-1278P-201ENST00000516130 107 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 RNU7-115P-201ENST00000516433 55 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 RNU6-1096P-201ENST00000517089 102 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 AC024405.2-202ENST00000532731 184 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 AC005357.1-201ENST00000588399 301 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 AL162424.1-201ENST00000602325 221 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 AL929325.1-201ENST00000603096 117 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 AL121890.5-201ENST00000620848 304 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 AC095038.3-201ENST00000634439 195 ntBASIC1.22□□□□□ -2.21
HDAC3O15379 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HDAC3O15379 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
HDAC3O15379 SNORA1B-201ENST00000362535 133 ntBASIC1.21□□□□□ -2.22
HDAC3O15379 Y_RNA.82-201ENST00000363000 102 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 232.6 ms