Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 Y_RNA.478-201ENST00000384358 107 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 MIR520A-201ENST00000384862 85 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 MIR17-201ENST00000385012 84 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 RNA5SP109-201ENST00000391010 116 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 AL512604.1-201ENST00000404812 257 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 BTF3P11-201ENST00000426582 477 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.650-201ENST00000459002 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 RNU7-141P-201ENST00000459304 62 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 RNU6-1023P-201ENST00000516137 106 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.673-201ENST00000516306 88 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.777-201ENST00000516982 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 RNU6-1096P-201ENST00000517089 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 RNA5SP437-201ENST00000517249 129 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.58□□□□□ -2.16
SIX2Q9NPC8 MIR4643-201ENST00000577473 78 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.771-201ENST00000598668 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 AP003357.1-201ENST00000604497 148 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 AL008718.3-201ENST00000610217 321 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.789-201ENST00000622480 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 snoU18.1-201ENST00000629629 71 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
SIX2Q9NPC8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.188-201ENST00000363952 111 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 SNORD27-201ENST00000363981 72 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 U8.7-201ENST00000364940 136 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.539-201ENST00000384635 107 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SIX2Q9NPC8 RNU6-651P-201ENST00000411040 105 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 AC009310.1-201ENST00000414414 451 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 AC245047.3-201ENST00000429428 127 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 SNORD2.1-201ENST00000458762 69 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 U8.19-201ENST00000459095 133 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 RNU7-115P-201ENST00000516433 55 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 RNU6-1291P-201ENST00000516591 104 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 RNU7-116P-201ENST00000516940 62 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 RNU6-341P-201ENST00000516973 96 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 AC024405.2-202ENST00000532731 184 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 BX284668.6-201ENST00000606899 438 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 MIR548AY-201ENST00000617669 107 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.57□□□□□ -2.16
SIX2Q9NPC8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.57□□□□□ -2.16
SIX2Q9NPC8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SIX2Q9NPC8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SIX2Q9NPC8 AC100821.1-201ENST00000523153 2479 ntBASIC1.57□□□□□ -2.16
SIX2Q9NPC8 AC134026.1-201ENST00000623249 2239 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 RNU6-899P-201ENST00000363947 107 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 RNU6-211P-201ENST00000384047 107 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 SNORA72-201ENST00000384339 132 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 MIR562-201ENST00000384894 95 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 MIR764-201ENST00000390811 85 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 SNORD58.1-201ENST00000391313 66 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 MTCO2P33-201ENST00000402100 465 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 RNA5SP233-201ENST00000459153 113 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 AC117454.1-201ENST00000491120 168 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 SNORA31.17-201ENST00000516953 127 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 RNU6-1271P-201ENST00000517049 105 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 AC127455.1-201ENST00000565496 145 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 DEFB122-202ENST00000569013 197 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 MIR4287-201ENST00000579398 78 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 MIR4282-201ENST00000583613 67 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 POLR3GP1-201ENST00000594073 261 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 AC006006.1-201ENST00000603082 144 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.56□□□□□ -2.16
SIX2Q9NPC8 AC013791.1-201ENST00000616619 62 ntBASIC1.56□□□□□ -2.16
SIX2Q9NPC8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.122-201ENST00000363331 96 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.267-201ENST00000364679 109 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 SNORA20.1-201ENST00000364790 130 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.489-201ENST00000384410 101 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 RNA5SP212-201ENST00000391223 107 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.590-201ENST00000410140 107 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 RPS29P29-201ENST00000456396 171 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 AC011604.1-201ENST00000545978 196 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 MIR4303-201ENST00000581299 66 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 AC005357.1-201ENST00000588399 301 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 AL773524.1-201ENST00000614065 229 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 AC068700.1-201ENST00000565862 3754 ntBASIC1.55□□□□□ -2.16
SIX2Q9NPC8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SIX2Q9NPC8 SNORA1B-201ENST00000362535 133 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.76-201ENST00000362931 109 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 RNU6-379P-201ENST00000363813 104 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 SNORA4.2-201ENST00000365313 147 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 RNU2-7P-201ENST00000410794 178 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 AC244636.1-201ENST00000421152 228 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 HSPE1P9-201ENST00000440046 311 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 HMGN2P23-201ENST00000456759 269 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 RNA5SP57-201ENST00000459463 123 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX2Q9NPC8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX2Q9NPC8 SNORA31.10-201ENST00000516482 106 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 AL358944.1-201ENST00000528537 144 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 AP002004.2-201ENST00000531656 154 ntBASIC1.54□□□□□ -2.16
SIX2Q9NPC8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.54□□□□□ -2.16
SIX2Q9NPC8 MIR5692C2-201ENST00000577959 77 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms