Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RPS27P16-201ENST00000425758 201 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 RPS20P10-201ENST00000451209 253 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 AC005042.3-201ENST00000453230 174 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 AC005840.1-201ENST00000498412 377 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 RNU6-341P-201ENST00000516973 96 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 AC019176.1-201ENST00000518519 225 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 AC022616.4-201ENST00000522985 181 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 AP003072.1-201ENST00000531740 145 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 MIR3684-201ENST00000579779 74 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 AC011373.1-201ENST00000607270 237 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 MIR8063-201ENST00000621930 81 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 ICE2P2-201ENST00000483823 2787 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 SNORD114-7-201ENST00000362520 77 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.64-201ENST00000362845 102 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 RNU4-80P-201ENST00000363200 141 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 SNORD113-8-201ENST00000363497 74 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.455-201ENST00000384230 98 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 SNORD115-46-201ENST00000390982 71 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 AC093850.1-201ENST00000454121 251 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 AC233266.1-201ENST00000454518 96 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 MTND5P22-201ENST00000458380 195 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 LINC01399-202ENST00000458450 244 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 snoU13.9-201ENST00000458927 103 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 RNU6-496P-201ENST00000516145 99 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 RNA5SP168-201ENST00000516642 112 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.07□□□□□ -2.24
NANOGQ9H9S0 AC131281.1-201ENST00000522984 164 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 MIR4778-201ENST00000577635 80 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 AL365434.2-201ENST00000607979 234 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 AC242852.1-201ENST00000612151 96 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 AC244015.1-201ENST00000622301 99 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 AC091895.1-201ENST00000624494 256 ntBASIC1.07□□□□□ -2.24
NANOGQ9H9S0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
NANOGQ9H9S0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.06□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.183-201ENST00000363882 113 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.210-201ENST00000364161 110 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.222-201ENST00000364264 102 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 RNU4-76P-201ENST00000364509 141 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.383-201ENST00000383855 97 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.512-201ENST00000384518 102 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.541-201ENST00000384640 113 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
NANOGQ9H9S0 RNU6-101P-201ENST00000410323 104 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 AC005534.2-201ENST00000431047 433 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 PGBD4P5-201ENST00000445958 426 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.06□□□□□ -2.24
NANOGQ9H9S0 AL049830.1-201ENST00000468034 425 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 RNU6-1278P-201ENST00000516130 107 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 RPL21P9-201ENST00000556149 474 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 MIR4781-201ENST00000585250 76 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 MIR376A1-201ENST00000616574 68 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 AC106754.2-201ENST00000623006 233 ntBASIC1.06□□□□□ -2.24
NANOGQ9H9S0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
NANOGQ9H9S0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
NANOGQ9H9S0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.16-201ENST00000362421 102 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 RNU6-801P-201ENST00000364087 105 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 U8.7-201ENST00000364940 136 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.326-201ENST00000365176 113 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 RNU6-424P-201ENST00000384367 105 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 MIR513A1-201ENST00000385138 129 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 RNU6-855P-201ENST00000410395 104 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 RN7SKP200-201ENST00000410564 320 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.05□□□□□ -2.24
NANOGQ9H9S0 AC027119.1-201ENST00000440877 241 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 HMGN1P10-201ENST00000474557 553 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 AC092991.1-201ENST00000477176 376 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.05□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.05□□□□□ -2.24
NANOGQ9H9S0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.05□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.4-201ENST00000362333 112 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.11-201ENST00000362375 109 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 RNU6-770P-201ENST00000363929 105 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.202-201ENST00000364083 110 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.526-201ENST00000384572 110 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 SNORA26.5-201ENST00000391215 123 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 RNU6-985P-201ENST00000410182 104 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 AC245517.4-201ENST00000448601 281 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 SUMO1P2-201ENST00000452524 304 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 RNU7-94P-201ENST00000459576 63 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 MTATP8P1-201ENST00000467115 207 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 AL591926.4-201ENST00000616895 298 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 AC073349.3-201ENST00000617616 186 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 AC134026.1-201ENST00000623249 2239 ntBASIC1.04□□□□□ -2.24
NANOGQ9H9S0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.04□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.19-201ENST00000362462 99 ntBASIC1.03□□□□□ -2.24
NANOGQ9H9S0 RNU6-392P-201ENST00000364926 101 ntBASIC1.03□□□□□ -2.24
NANOGQ9H9S0 RNA5SP259-201ENST00000365541 109 ntBASIC1.03□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.03□□□□□ -2.24
NANOGQ9H9S0 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
NANOGQ9H9S0 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
NANOGQ9H9S0 MIR660-201ENST00000385235 97 ntBASIC1.03□□□□□ -2.24
NANOGQ9H9S0 AL034345.1-201ENST00000407768 123 ntBASIC1.03□□□□□ -2.24
NANOGQ9H9S0 MIR1278-201ENST00000408753 81 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms