Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 RPS3AP1-201ENST00000413190 320 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AL354751.2-201ENST00000415471 210 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AC104332.1-201ENST00000440471 797 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AC018710.1-201ENST00000506509 158 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AC023442.1-201ENST00000531247 422 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AL353765.1-201ENST00000605514 183 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 MIR6128-201ENST00000615528 109 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 uc_338.17-201ENST00000619633 179 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AC090617.10-201ENST00000624308 134 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 MIR103A2-201ENST00000362154 78 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 RNA5SP98-201ENST00000363158 137 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.358-201ENST00000365491 99 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 MIR452-201ENST00000385020 85 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 SNORA75.2-201ENST00000391138 150 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 SNORA75.3-201ENST00000391231 150 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 MIR190B-201ENST00000401119 79 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 MIR1298-201ENST00000408783 112 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 PIGPP3-201ENST00000425307 415 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 AL392103.1-201ENST00000447000 198 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 snoU13.25-201ENST00000458945 104 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 RPL17P19-201ENST00000489069 552 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.704-201ENST00000516851 102 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 MIR4764-201ENST00000580680 88 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 AC120024.3-201ENST00000603167 156 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 AC018462.2-201ENST00000605375 395 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 AL096861.1-201ENST00000610899 123 ntBASIC0.37□□□□□ -2.35
SHANK3Q9BYB0 AC134026.1-201ENST00000623249 2239 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.106-201ENST00000363189 100 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 RNU6-923P-201ENST00000364753 107 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 RNU4-12P-201ENST00000365233 139 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.361-201ENST00000365515 120 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 RNU6-780P-201ENST00000391030 104 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 MIR1185-1-201ENST00000408598 86 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 MTATP6P17-201ENST00000431030 672 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 AL162725.1-201ENST00000435405 301 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 MTND1P17-201ENST00000448961 204 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 RNU6-625P-201ENST00000459412 107 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 CYCTP-201ENST00000504253 315 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 RNU6-307P-201ENST00000516743 106 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 MIR3942-201ENST00000585264 109 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 AC104695.3-201ENST00000604052 296 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 AL136317.1-201ENST00000612653 226 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 AC015540.1-201ENST00000615828 501 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 MIR3674-201ENST00000636576 68 ntBASIC0.36□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.557-201ENST00000384680 107 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 AC233266.1-201ENST00000454518 96 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 RNU6-329P-201ENST00000459618 107 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 AC242852.1-201ENST00000612151 96 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 AC240442.1-201ENST00000616055 283 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 AC244015.1-201ENST00000622301 99 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 snoU2-30.1-201ENST00000365012 70 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 RNU6-1264P-201ENST00000383891 107 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 RNU6-1001P-201ENST00000411265 100 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 RPL23AP50-201ENST00000434149 455 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 AC067940.1-201ENST00000458411 300 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 RNU6-1096P-201ENST00000517089 102 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 SNORA74.3-201ENST00000517108 154 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 MTND4LP26-201ENST00000518144 282 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 AC092794.2-201ENST00000620933 563 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.35□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.41-201ENST00000362646 102 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 MIR604-201ENST00000384880 94 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 MIR873-201ENST00000401120 77 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 Y_RNA.610-201ENST00000410681 103 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 AC074085.1-201ENST00000413598 418 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 RPS26P5-201ENST00000418544 335 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 MRPS18CP6-201ENST00000423587 223 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 DLGAP5P1-201ENST00000430307 464 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 AC114811.1-201ENST00000507207 168 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 RNU4-54P-201ENST00000516428 129 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 AC022079.1-201ENST00000621546 602 ntBASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.34□□□□□ -2.36
SHANK3Q9BYB0 SNORA9.1-201ENST00000362412 131 ntBASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 Y_RNA.573-201ENST00000384763 105 ntBASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 MIR15B-201ENST00000385045 98 ntBASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 MIR605-201ENST00000385078 83 ntBASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 RNU6-1156P-201ENST00000410365 100 ntBASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 AC092423.1-201ENST00000430165 186 ntBASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 ELOCP24-201ENST00000456370 334 ntBASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 RNU6-1337P-201ENST00000516525 95 ntBASIC0.33□□□□□ -2.36
SHANK3Q9BYB0 RNU6-1314P-201ENST00000517139 104 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms