Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.41□□□□□ -2.18
CMTM3Q96MX0 AL161670.1-201ENST00000554348 137 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 7SK.8-201ENST00000612110 250 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 7SK.11-201ENST00000615477 250 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 7SK.13-201ENST00000622040 250 ntBASIC1.41□□□□□ -2.18
CMTM3Q96MX0 Y_RNA.19-201ENST00000362462 99 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 RNU6-801P-201ENST00000364087 105 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 Y_RNA.210-201ENST00000364161 110 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 MLLT10P1-201ENST00000418346 262 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.4□□□□□ -2.19
CMTM3Q96MX0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.4□□□□□ -2.19
CMTM3Q96MX0 RPL23AP54-201ENST00000495129 419 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 RNU6-1143P-201ENST00000516125 104 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 RNY3P15-201ENST00000516297 97 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 RNU6-764P-201ENST00000516396 105 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 RNU6-1137P-201ENST00000517073 99 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 AC127455.1-201ENST00000565496 145 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 MIR4255-201ENST00000579351 72 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 MIR548AY-201ENST00000617669 107 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 MIR8065-201ENST00000620577 100 ntBASIC1.4□□□□□ -2.19
CMTM3Q96MX0 Y_RNA.203-201ENST00000364106 102 ntBASIC1.39□□□□□ -2.19
CMTM3Q96MX0 SNORA72.4-201ENST00000384174 132 ntBASIC1.39□□□□□ -2.19
CMTM3Q96MX0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CMTM3Q96MX0 AL451046.2-201ENST00000403074 277 ntBASIC1.39□□□□□ -2.19
CMTM3Q96MX0 RNU6-985P-201ENST00000410182 104 ntBASIC1.39□□□□□ -2.19
CMTM3Q96MX0 RN7SKP101-201ENST00000411376 320 ntBASIC1.39□□□□□ -2.19
CMTM3Q96MX0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.39□□□□□ -2.19
CMTM3Q96MX0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.39□□□□□ -2.19
CMTM3Q96MX0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.39□□□□□ -2.19
CMTM3Q96MX0 Y_RNA.153-201ENST00000363615 91 ntBASIC1.38□□□□□ -2.19
CMTM3Q96MX0 SNORD41-201ENST00000386967 70 ntBASIC1.38□□□□□ -2.19
CMTM3Q96MX0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.38□□□□□ -2.19
CMTM3Q96MX0 SNRPGP10-201ENST00000432323 225 ntBASIC1.38□□□□□ -2.19
CMTM3Q96MX0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.38□□□□□ -2.19
CMTM3Q96MX0 RNU7-141P-201ENST00000459304 62 ntBASIC1.38□□□□□ -2.19
CMTM3Q96MX0 AC098869.1-201ENST00000481627 292 ntBASIC1.38□□□□□ -2.19
CMTM3Q96MX0 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
CMTM3Q96MX0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.38□□□□□ -2.19
CMTM3Q96MX0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.38□□□□□ -2.19
CMTM3Q96MX0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.38□□□□□ -2.19
CMTM3Q96MX0 RNU6-1084P-201ENST00000362498 107 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 snoU2_19.2-201ENST00000363024 80 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 RNU6-290P-201ENST00000365212 101 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 MIR452-201ENST00000385020 85 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 MIR320A-201ENST00000385302 82 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 RNU6-131P-201ENST00000391144 107 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 SNORA40.18-201ENST00000391200 128 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 RNU2-14P-201ENST00000411053 191 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 MTND4LP30-201ENST00000454092 297 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 SNORD45.4-201ENST00000516629 73 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 AC110588.1-201ENST00000559699 137 ntBASIC1.37□□□□□ -2.19
CMTM3Q96MX0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CMTM3Q96MX0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CMTM3Q96MX0 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 RNU6-1048P-201ENST00000364054 107 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 snoU2-30.1-201ENST00000365012 70 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 RNU6-806P-201ENST00000365147 105 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 MIR526A1-201ENST00000384897 85 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 SNORA36B-201ENST00000410438 131 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 MTCO1P5-201ENST00000433573 344 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 FAM106DP-201ENST00000586416 501 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 AL357312.1-201ENST00000603879 298 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 MIR502-201ENST00000606349 86 ntBASIC1.36□□□□□ -2.19
CMTM3Q96MX0 RNU6-674P-201ENST00000363831 107 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 RNU6-969P-201ENST00000383900 105 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 Y_RNA.422-201ENST00000384054 114 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 Y_RNA.541-201ENST00000384640 113 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 MIR215-201ENST00000384858 110 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 SNORA53-201ENST00000391141 249 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 SNORA26.5-201ENST00000391215 123 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 MIR1298-201ENST00000408783 112 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 RPL21P38-201ENST00000418090 167 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 AC003989.2-201ENST00000440224 169 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 MRPS35P2-201ENST00000508242 191 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 RNU2-31P-201ENST00000516954 155 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 AP003733.2-201ENST00000529409 171 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 MIR2681-201ENST00000581814 105 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 AL512605.2-201ENST00000592972 256 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CMTM3Q96MX0 AC007742.2-201ENST00000618226 398 ntBASIC1.35□□□□□ -2.19
CMTM3Q96MX0 RNU6-899P-201ENST00000363947 107 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 SNORD50B-201ENST00000364995 70 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 RNU6-326P-201ENST00000365480 107 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 AL731563.1-201ENST00000442202 214 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 HMGN2P32-201ENST00000444648 269 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 RNU6-437P-201ENST00000459408 95 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 UBL5P3-201ENST00000475112 231 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 AC037487.3-201ENST00000606668 112 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 JPX_2.1-201ENST00000614161 69 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 AC084768.2-201ENST00000622736 221 ntBASIC1.34□□□□□ -2.19
CMTM3Q96MX0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CMTM3Q96MX0 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 Y_RNA.26-201ENST00000362539 101 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 Y_RNA.64-201ENST00000362845 102 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms