Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AC133485.1-201ENST00000567176 124 ntBASIC0.82□□□□□ -2.28
CCDC43Q96MW1 AC138907.6-201ENST00000568401 126 ntBASIC0.82□□□□□ -2.28
CCDC43Q96MW1 AC131055.1-201ENST00000584626 316 ntBASIC0.82□□□□□ -2.28
CCDC43Q96MW1 SEPT14P17-201ENST00000617978 177 ntBASIC0.82□□□□□ -2.28
CCDC43Q96MW1 AC098679.4-201ENST00000624241 654 ntBASIC0.82□□□□□ -2.28
CCDC43Q96MW1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC43Q96MW1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CCDC43Q96MW1 RNY3P11-201ENST00000364153 102 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 SNORD14.1-201ENST00000365609 90 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 RNU6-310P-201ENST00000384655 107 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 SNORA75.6-201ENST00000391318 127 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 MIR1185-1-201ENST00000408598 86 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 RNU6-370P-201ENST00000411008 104 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 RNU2-61P-201ENST00000411069 191 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 RPS26P5-201ENST00000418544 335 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 Y_RNA.635-201ENST00000459041 101 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 RNU6-436P-201ENST00000516171 114 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 RNU6-155P-201ENST00000516347 100 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 Y_RNA.691-201ENST00000516611 103 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 MIR4764-201ENST00000580680 88 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.81□□□□□ -2.28
CCDC43Q96MW1 Y_RNA.116-201ENST00000363292 103 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 Y_RNA.160-201ENST00000363677 92 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 Y_RNA.446-201ENST00000384178 104 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 RNU6-1297P-201ENST00000384415 104 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 AC117454.1-201ENST00000491120 168 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 RNU6-966P-201ENST00000516479 104 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 RNU6-1012P-201ENST00000516606 109 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 RNU7-4P-201ENST00000516961 62 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 AC144568.1-201ENST00000520139 137 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 AC022616.4-201ENST00000522985 181 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 AC005972.2-201ENST00000604690 348 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 AC011476.5-201ENST00000615594 130 ntBASIC0.8□□□□□ -2.28
CCDC43Q96MW1 RNU6-1188P-201ENST00000363795 107 ntBASIC0.79□□□□□ -2.28
CCDC43Q96MW1 RNY3P4-201ENST00000384428 101 ntBASIC0.79□□□□□ -2.28
CCDC43Q96MW1 Y_RNA.605-201ENST00000410577 105 ntBASIC0.79□□□□□ -2.28
CCDC43Q96MW1 CHEK2P4-201ENST00000450340 246 ntBASIC0.79□□□□□ -2.28
CCDC43Q96MW1 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.79□□□□□ -2.28
CCDC43Q96MW1 PRDX4P1-201ENST00000507189 574 ntBASIC0.79□□□□□ -2.28
CCDC43Q96MW1 AC109810.1-201ENST00000534066 224 ntBASIC0.79□□□□□ -2.28
CCDC43Q96MW1 MIR5690-201ENST00000583739 73 ntBASIC0.79□□□□□ -2.28
CCDC43Q96MW1 AC104465.1-201ENST00000611365 139 ntBASIC0.79□□□□□ -2.28
CCDC43Q96MW1 Y_RNA.122-201ENST00000363331 96 ntBASIC0.78□□□□□ -2.28
CCDC43Q96MW1 Y_RNA.279-201ENST00000364763 95 ntBASIC0.78□□□□□ -2.28
CCDC43Q96MW1 SNORD50B-201ENST00000364995 70 ntBASIC0.78□□□□□ -2.28
CCDC43Q96MW1 RNU6-890P-201ENST00000384121 107 ntBASIC0.78□□□□□ -2.28
CCDC43Q96MW1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
CCDC43Q96MW1 PDCL2P1-201ENST00000419302 352 ntBASIC0.78□□□□□ -2.28
CCDC43Q96MW1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.78□□□□□ -2.28
CCDC43Q96MW1 snoU2-30.1-201ENST00000365012 70 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 MIR518E-201ENST00000385252 88 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CCDC43Q96MW1 SNORD89-201ENST00000390981 114 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 SNORD78.2-201ENST00000391076 69 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 RNU6-131P-201ENST00000391144 107 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 MTND5P15-201ENST00000434246 349 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 FGF7P6-202ENST00000451282 293 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 RNU6-470P-201ENST00000515954 104 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 DEFB108E-201ENST00000524692 240 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 MIR4659A-201ENST00000580269 81 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.77□□□□□ -2.29
CCDC43Q96MW1 TPTEP1-208ENST00000636884 213 ntBASIC0.77□□□□□ -2.29
CCDC43Q96MW1 Y_RNA.166-201ENST00000363730 102 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 RNU6-42P-201ENST00000384165 107 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 SNORA72-201ENST00000384339 132 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 MIR15B-201ENST00000385045 98 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC43Q96MW1 SNRPGP10-201ENST00000432323 225 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 SNORD123-201ENST00000459473 70 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 AC113410.1-201ENST00000505029 247 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 RN7SKP164-201ENST00000516138 266 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 RNU7-43P-201ENST00000516554 64 ntBASIC0.76□□□□□ -2.29
CCDC43Q96MW1 SNORD81.2-201ENST00000365153 76 ntBASIC0.75□□□□□ -2.29
CCDC43Q96MW1 RNY1P14-201ENST00000384426 108 ntBASIC0.75□□□□□ -2.29
CCDC43Q96MW1 RNU6-876P-201ENST00000391295 104 ntBASIC0.75□□□□□ -2.29
CCDC43Q96MW1 U7.7-201ENST00000459276 60 ntBASIC0.75□□□□□ -2.29
CCDC43Q96MW1 7SK.10-201ENST00000621414 298 ntBASIC0.75□□□□□ -2.29
CCDC43Q96MW1 Y_RNA.146-201ENST00000363549 102 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 Y_RNA.314-201ENST00000365114 102 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 Y_RNA.329-201ENST00000365209 107 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 RNU6-708P-201ENST00000384217 107 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 SNORD99-201ENST00000408612 74 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 U8.19-201ENST00000459095 133 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 Y_RNA.714-201ENST00000517065 90 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 MIR5000-201ENST00000577717 103 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 U2.1-201ENST00000618978 145 ntBASIC0.74□□□□□ -2.29
CCDC43Q96MW1 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
CCDC43Q96MW1 RNA5SP48-201ENST00000363969 126 ntBASIC0.73□□□□□ -2.29
CCDC43Q96MW1 Y_RNA.368-201ENST00000365547 113 ntBASIC0.73□□□□□ -2.29
CCDC43Q96MW1 RNU6-110P-201ENST00000384508 104 ntBASIC0.73□□□□□ -2.29
CCDC43Q96MW1 MT-TL1-201ENST00000386347 75 ntBASIC0.73□□□□□ -2.29
CCDC43Q96MW1 RNU6-192P-201ENST00000391253 100 ntBASIC0.73□□□□□ -2.29
CCDC43Q96MW1 Y_RNA.599-201ENST00000410489 109 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms