Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RPS27P22-201ENST00000478056 241 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 RNA5SP458-201ENST00000516188 119 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 AL078604.3-201ENST00000615580 211 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.42□□□□□ -2.18
RTL3Q8N8U3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.42□□□□□ -2.18
RTL3Q8N8U3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.47-201ENST00000362697 108 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.176-201ENST00000363815 109 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 RNU6-407P-201ENST00000365280 104 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 MIR513A1-201ENST00000385138 129 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 Y_RNA.602-201ENST00000410535 92 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 RN7SKP51-201ENST00000410781 304 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 SNX2P2-201ENST00000424553 323 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 MTND3P2-201ENST00000438452 342 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 RPS27P1-201ENST00000450552 247 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 AL163195.1-201ENST00000496941 348 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 RNU6-1337P-201ENST00000516525 95 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 AC008269.2-201ENST00000561915 1105 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 AC091178.2-201ENST00000584401 117 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 DEFB117-201ENST00000602356 141 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 AP001282.2-201ENST00000616149 309 ntBASIC1.41□□□□□ -2.18
RTL3Q8N8U3 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.149-201ENST00000363558 117 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 RNU6-326P-201ENST00000365480 107 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.368-201ENST00000365547 113 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.376-201ENST00000365638 108 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 MIR194-1-201ENST00000384892 85 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 MT-TW-201ENST00000387382 68 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 snosnR66.1-201ENST00000391095 99 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 RNU6-710P-201ENST00000410424 105 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.4□□□□□ -2.19
RTL3Q8N8U3 AC010154.1-201ENST00000425857 269 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 POLR2KP2-201ENST00000438155 177 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.4□□□□□ -2.19
RTL3Q8N8U3 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 RNU7-172P-201ENST00000517125 64 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 AC027419.1-201ENST00000522976 328 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.4□□□□□ -2.19
RTL3Q8N8U3 AL162730.1-201ENST00000605734 292 ntBASIC1.4□□□□□ -2.19
RTL3Q8N8U3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.4□□□□□ -2.19
RTL3Q8N8U3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.39□□□□□ -2.19
RTL3Q8N8U3 MIR335-201ENST00000362173 94 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 RNU6-324P-201ENST00000363957 106 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.569-201ENST00000384749 103 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 RNU6-713P-201ENST00000384761 107 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 RNA5SP109-201ENST00000391010 116 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 MTCO1P5-201ENST00000433573 344 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 AL606517.2-201ENST00000442855 241 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 RNU6-1338P-201ENST00000516328 91 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.39□□□□□ -2.19
RTL3Q8N8U3 MIR4421-201ENST00000578133 69 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 MIR3145-201ENST00000580727 82 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 AC022217.4-201ENST00000604389 163 ntBASIC1.39□□□□□ -2.19
RTL3Q8N8U3 AC018630.2-201ENST00000534866 2403 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.16-201ENST00000362421 102 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 RNA5SP259-201ENST00000365541 109 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.38□□□□□ -2.19
RTL3Q8N8U3 SNORD116-13-201ENST00000384408 92 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
RTL3Q8N8U3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.38□□□□□ -2.19
RTL3Q8N8U3 AP1B1P2-201ENST00000416196 106 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 BTF3P4-201ENST00000418852 495 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 AL162725.1-201ENST00000435405 301 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 AL603825.1-201ENST00000438481 80 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.38□□□□□ -2.19
RTL3Q8N8U3 RPS20P10-201ENST00000451209 253 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 MTND4LP30-201ENST00000454092 297 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.38□□□□□ -2.19
RTL3Q8N8U3 TRBVB-201ENST00000477100 408 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 RPL30P7-201ENST00000479312 323 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 RNU6-191P-201ENST00000516295 94 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.38□□□□□ -2.19
RTL3Q8N8U3 AC073413.2-201ENST00000604332 360 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 AC004832.4-201ENST00000608952 331 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.38□□□□□ -2.19
RTL3Q8N8U3 UBE2WP1-201ENST00000362030 340 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 MIR378A-201ENST00000362177 66 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 RNU4-80P-201ENST00000363200 141 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 RNU6-238P-201ENST00000363313 106 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.396-201ENST00000383949 103 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.483-201ENST00000384380 101 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.37□□□□□ -2.19
RTL3Q8N8U3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.37□□□□□ -2.19
RTL3Q8N8U3 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 RNU7-94P-201ENST00000459576 63 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 SERF1AP1-201ENST00000514575 187 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 Y_RNA.668-201ENST00000516233 93 ntBASIC1.37□□□□□ -2.19
RTL3Q8N8U3 RNU2-31P-201ENST00000516954 155 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms