Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 RNU6-199P-201ENST00000362954 107 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.384-201ENST00000383909 102 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 RNU6-1040P-201ENST00000383974 107 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.446-201ENST00000384178 104 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.463-201ENST00000384271 102 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 SNORD116-13-201ENST00000384408 92 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.529-201ENST00000384586 119 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 SNORD41-201ENST00000386967 70 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 AL031003.1-201ENST00000404229 172 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 RNU2-54P-201ENST00000410299 190 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 AL354751.2-201ENST00000415471 210 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 RNU6-1132P-201ENST00000459214 107 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 RNU6-507P-201ENST00000516045 100 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 RNU6-947P-201ENST00000516264 106 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 RNU6-917P-201ENST00000516294 104 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 AC005176.2-201ENST00000596933 147 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 GHRLOS.1-201ENST00000610995 70 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 AC106800.4-201ENST00000614905 153 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 AC133104.2-201ENST00000615272 193 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 AC104985.2-201ENST00000620598 500 ntBASIC0.63□□□□□ -2.31
TNFRSF9Q07011 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.58-201ENST00000362807 102 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.154-201ENST00000363624 102 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.187-201ENST00000363918 113 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 RNY3P1-201ENST00000365085 102 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 RNY3-201ENST00000365484 102 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.496-201ENST00000384444 101 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 MIR598-201ENST00000384868 97 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 MIR562-201ENST00000384894 95 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 MIR520G-201ENST00000385064 90 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
TNFRSF9Q07011 SNORD78.2-201ENST00000391076 69 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 RNA5SP482-201ENST00000391269 118 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 AL162725.1-201ENST00000435405 301 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 AC099799.1-201ENST00000439809 192 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 SUMO1P2-201ENST00000452524 304 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 FGF7P4-201ENST00000509595 295 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 RNU6-436P-201ENST00000516171 114 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 RNU6-911P-201ENST00000516523 104 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 AC093027.1-201ENST00000546698 429 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 AC090049.2-201ENST00000550377 109 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.62□□□□□ -2.31
TNFRSF9Q07011 AC006380.1-201ENST00000603598 186 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 PVT1_3.1-201ENST00000620853 95 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 U6.92-201ENST00000636464 89 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
TNFRSF9Q07011 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.27-201ENST00000362540 103 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.80-201ENST00000362996 102 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 SNORD68-201ENST00000363214 84 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 RNU6-324P-201ENST00000363957 106 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 SNORA2.2-201ENST00000365473 135 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.356-201ENST00000365475 113 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.485-201ENST00000384395 102 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.540-201ENST00000384638 111 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 MIR19B1-201ENST00000384829 87 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 MIR628-201ENST00000385229 95 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.621-201ENST00000411065 96 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 PIGPP3-201ENST00000425307 415 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.61□□□□□ -2.31
TNFRSF9Q07011 AC104332.1-201ENST00000440471 797 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 AC093019.1-201ENST00000443135 252 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 RNU7-152P-201ENST00000458982 64 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 AC048334.1-201ENST00000477975 159 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 SNORA25.10-201ENST00000515926 124 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 RNU6-155P-201ENST00000516347 100 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 AL358944.1-201ENST00000528537 144 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 AC006600.1-201ENST00000572529 153 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 VN1R91P-201ENST00000594377 169 ntBASIC0.61□□□□□ -2.31
TNFRSF9Q07011 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.146-201ENST00000363549 102 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.329-201ENST00000365209 107 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.363-201ENST00000365529 113 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 Y_RNA.428-201ENST00000384078 102 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 MIR608-201ENST00000384820 100 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 MIR526A1-201ENST00000384897 85 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 RNU2-61P-201ENST00000411069 191 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 RNU6-1054P-201ENST00000411293 104 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 MTCO2P27-201ENST00000420740 428 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 SNORD19B-201ENST00000459623 84 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.6□□□□□ -2.31
TNFRSF9Q07011 RNU6-322P-201ENST00000516010 103 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 SNORA31.2-201ENST00000516019 134 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 SNORA70.12-201ENST00000516084 153 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 RNU6-197P-201ENST00000516680 100 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 SNORD116.3-201ENST00000517176 78 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 AC022441.3-201ENST00000605737 136 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 AC004832.4-201ENST00000608952 331 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 AL591926.4-201ENST00000616895 298 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 AC091925.1-201ENST00000623204 462 ntBASIC0.6□□□□□ -2.31
TNFRSF9Q07011 MIR4272-201ENST00000635924 64 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 276.1 ms