Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MRPS18CP6-201ENST00000423587 223 ntBASIC0.36□□□□□ -2.35
RFC3P40938 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.36□□□□□ -2.35
RFC3P40938 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
RFC3P40938 MTND1P4-201ENST00000435196 415 ntBASIC0.36□□□□□ -2.35
RFC3P40938 MTND2P22-201ENST00000444325 1033 ntBASIC0.36□□□□□ -2.35
RFC3P40938 HMGN2P32-201ENST00000444648 269 ntBASIC0.36□□□□□ -2.35
RFC3P40938 SNORA25.10-201ENST00000515926 124 ntBASIC0.36□□□□□ -2.35
RFC3P40938 RNU4-57P-201ENST00000515980 135 ntBASIC0.36□□□□□ -2.35
RFC3P40938 RNU6-1016P-201ENST00000516689 94 ntBASIC0.36□□□□□ -2.35
RFC3P40938 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
RFC3P40938 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
RFC3P40938 Y_RNA.2-201ENST00000362330 96 ntBASIC0.35□□□□□ -2.35
RFC3P40938 RNU6-1084P-201ENST00000362498 107 ntBASIC0.35□□□□□ -2.35
RFC3P40938 RNU6-1301P-201ENST00000362724 104 ntBASIC0.35□□□□□ -2.35
RFC3P40938 Y_RNA.89-201ENST00000363031 102 ntBASIC0.35□□□□□ -2.35
RFC3P40938 snoU2-30.1-201ENST00000365012 70 ntBASIC0.35□□□□□ -2.35
RFC3P40938 Y_RNA.594-201ENST00000410373 140 ntBASIC0.35□□□□□ -2.35
RFC3P40938 SNORD12B-201ENST00000410433 91 ntBASIC0.35□□□□□ -2.35
RFC3P40938 RNA5SP222-201ENST00000411039 105 ntBASIC0.35□□□□□ -2.35
RFC3P40938 AL358176.2-201ENST00000425769 204 ntBASIC0.35□□□□□ -2.35
RFC3P40938 U8.19-201ENST00000459095 133 ntBASIC0.35□□□□□ -2.35
RFC3P40938 AC093027.1-201ENST00000546698 429 ntBASIC0.35□□□□□ -2.35
RFC3P40938 AC024909.2-201ENST00000553035 286 ntBASIC0.35□□□□□ -2.35
RFC3P40938 AC004467.1-201ENST00000615678 330 ntBASIC0.35□□□□□ -2.35
RFC3P40938 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.35□□□□□ -2.35
RFC3P40938 MIR6516-201ENST00000630554 81 ntBASIC0.35□□□□□ -2.35
RFC3P40938 AC134026.1-201ENST00000623249 2239 ntBASIC0.35□□□□□ -2.35
RFC3P40938 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
RFC3P40938 Y_RNA.473-201ENST00000384333 102 ntBASIC0.34□□□□□ -2.36
RFC3P40938 Y_RNA.517-201ENST00000384551 106 ntBASIC0.34□□□□□ -2.36
RFC3P40938 RNU6-1050P-201ENST00000410388 107 ntBASIC0.34□□□□□ -2.36
RFC3P40938 AL390729.2-201ENST00000416137 156 ntBASIC0.34□□□□□ -2.36
RFC3P40938 AC005534.2-201ENST00000431047 433 ntBASIC0.34□□□□□ -2.36
RFC3P40938 AL353997.1-201ENST00000432936 108 ntBASIC0.34□□□□□ -2.36
RFC3P40938 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.34□□□□□ -2.36
RFC3P40938 AC105313.1-201ENST00000509121 353 ntBASIC0.34□□□□□ -2.36
RFC3P40938 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.34□□□□□ -2.36
RFC3P40938 Y_RNA.682-201ENST00000516457 100 ntBASIC0.34□□□□□ -2.36
RFC3P40938 MIR2355-201ENST00000517199 87 ntBASIC0.34□□□□□ -2.36
RFC3P40938 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.34□□□□□ -2.36
RFC3P40938 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.34□□□□□ -2.36
RFC3P40938 AC104695.3-201ENST00000604052 296 ntBASIC0.34□□□□□ -2.36
RFC3P40938 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
RFC3P40938 Y_RNA.194-201ENST00000363985 102 ntBASIC0.33□□□□□ -2.36
RFC3P40938 RNU6-654P-201ENST00000364373 107 ntBASIC0.33□□□□□ -2.36
RFC3P40938 SNORA36.2-201ENST00000384004 127 ntBASIC0.33□□□□□ -2.36
RFC3P40938 RNU6-613P-201ENST00000410412 108 ntBASIC0.33□□□□□ -2.36
RFC3P40938 MLLT10P1-201ENST00000418346 262 ntBASIC0.33□□□□□ -2.36
RFC3P40938 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.33□□□□□ -2.36
RFC3P40938 RNU4-49P-201ENST00000516080 140 ntBASIC0.33□□□□□ -2.36
RFC3P40938 AC103591.3-201ENST00000608684 209 ntBASIC0.33□□□□□ -2.36
RFC3P40938 AC008133.2-201ENST00000624540 351 ntBASIC0.33□□□□□ -2.36
RFC3P40938 MIR4251-201ENST00000635819 61 ntBASIC0.33□□□□□ -2.36
RFC3P40938 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.33□□□□□ -2.36
RFC3P40938 MIR1-1-201ENST00000362147 71 ntBASIC0.32□□□□□ -2.36
RFC3P40938 SNORD50B-201ENST00000364995 70 ntBASIC0.32□□□□□ -2.36
RFC3P40938 SNORA2B-201ENST00000384583 137 ntBASIC0.32□□□□□ -2.36
RFC3P40938 Y_RNA.573-201ENST00000384763 105 ntBASIC0.32□□□□□ -2.36
RFC3P40938 AL031003.1-201ENST00000404229 172 ntBASIC0.32□□□□□ -2.36
RFC3P40938 RNU6-177P-201ENST00000411257 104 ntBASIC0.32□□□□□ -2.36
RFC3P40938 RPS29P25-201ENST00000481709 171 ntBASIC0.32□□□□□ -2.36
RFC3P40938 RNU6-408P-201ENST00000515910 100 ntBASIC0.32□□□□□ -2.36
RFC3P40938 MIR4300-201ENST00000581016 96 ntBASIC0.32□□□□□ -2.36
RFC3P40938 AC006380.1-201ENST00000603598 186 ntBASIC0.32□□□□□ -2.36
RFC3P40938 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.32□□□□□ -2.36
RFC3P40938 AC015540.1-201ENST00000615828 501 ntBASIC0.32□□□□□ -2.36
RFC3P40938 AC091925.1-201ENST00000623204 462 ntBASIC0.32□□□□□ -2.36
RFC3P40938 Y_RNA.258-201ENST00000364613 105 ntBASIC0.31□□□□□ -2.36
RFC3P40938 Y_RNA.450-201ENST00000384198 113 ntBASIC0.31□□□□□ -2.36
RFC3P40938 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
RFC3P40938 RNU6-131P-201ENST00000391144 107 ntBASIC0.31□□□□□ -2.36
RFC3P40938 RNU2-61P-201ENST00000411069 191 ntBASIC0.31□□□□□ -2.36
RFC3P40938 RNU6-329P-201ENST00000459618 107 ntBASIC0.31□□□□□ -2.36
RFC3P40938 Y_RNA.708-201ENST00000516950 96 ntBASIC0.31□□□□□ -2.36
RFC3P40938 Y_RNA.714-201ENST00000517065 90 ntBASIC0.31□□□□□ -2.36
RFC3P40938 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
RFC3P40938 AC018638.8-201ENST00000588755 281 ntBASIC0.31□□□□□ -2.36
RFC3P40938 AL355073.2-201ENST00000612106 557 ntBASIC0.31□□□□□ -2.36
RFC3P40938 Y_RNA.295-201ENST00000364918 102 ntBASIC0.3□□□□□ -2.36
RFC3P40938 Y_RNA.370-201ENST00000365589 108 ntBASIC0.3□□□□□ -2.36
RFC3P40938 MIR140-201ENST00000385282 100 ntBASIC0.3□□□□□ -2.36
RFC3P40938 MIR548K-201ENST00000408406 116 ntBASIC0.3□□□□□ -2.36
RFC3P40938 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
RFC3P40938 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.3□□□□□ -2.36
RFC3P40938 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.3□□□□□ -2.36
RFC3P40938 AC116353.2-201ENST00000505332 712 ntBASIC0.3□□□□□ -2.36
RFC3P40938 MIR2115-201ENST00000516657 100 ntBASIC0.3□□□□□ -2.36
RFC3P40938 RNA5SP330-201ENST00000517096 96 ntBASIC0.3□□□□□ -2.36
RFC3P40938 AC055872.1-201ENST00000570978 278 ntBASIC0.3□□□□□ -2.36
RFC3P40938 AC005899.2-201ENST00000584353 90 ntBASIC0.3□□□□□ -2.36
RFC3P40938 AC005972.2-201ENST00000604690 348 ntBASIC0.3□□□□□ -2.36
RFC3P40938 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.3□□□□□ -2.36
RFC3P40938 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
RFC3P40938 Y_RNA.168-201ENST00000363740 102 ntBASIC0.29□□□□□ -2.36
RFC3P40938 Y_RNA.172-201ENST00000363765 102 ntBASIC0.29□□□□□ -2.36
RFC3P40938 RNU6-961P-201ENST00000363893 105 ntBASIC0.29□□□□□ -2.36
RFC3P40938 RNU6-716P-201ENST00000365621 103 ntBASIC0.29□□□□□ -2.36
RFC3P40938 RNY1P8-201ENST00000383970 114 ntBASIC0.29□□□□□ -2.36
RFC3P40938 SNORD116-2-201ENST00000384274 95 ntBASIC0.29□□□□□ -2.36
RFC3P40938 SNORA72-201ENST00000384339 132 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms