Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.8□□□□□ -2.12
NR1D1P20393 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 TRMT112P2-201ENST00000512910 132 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 Y_RNA.700-201ENST00000516806 100 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.8□□□□□ -2.12
NR1D1P20393 AC130289.1-201ENST00000577321 73 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 AL512605.2-201ENST00000592972 256 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 AL359821.1-201ENST00000605519 182 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.8□□□□□ -2.12
NR1D1P20393 snoU2-30.2-201ENST00000362805 70 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 Y_RNA.224-201ENST00000364308 111 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 Y_RNA.785-201ENST00000384290 109 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 RNU6-1289P-201ENST00000384431 106 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 BTF3P4-201ENST00000418852 495 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
NR1D1P20393 COX6CP14-201ENST00000469580 174 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 RNU6-138P-201ENST00000515952 107 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 RNA5SP20-201ENST00000515976 84 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 RNVU1-2-201ENST00000516326 135 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 AC005786.1-201ENST00000588553 154 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 AL442067.1-201ENST00000613261 223 ntBASIC1.79□□□□□ -2.12
NR1D1P20393 Y_RNA.117-201ENST00000363294 101 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 Y_RNA.200-201ENST00000364018 102 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 RNU1-96P-201ENST00000364163 162 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 RNY4P28-201ENST00000365281 93 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 Y_RNA.368-201ENST00000365547 113 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 Y_RNA.456-201ENST00000384232 111 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 RNU6-662P-201ENST00000384253 104 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 Y_RNA.540-201ENST00000384638 111 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 MIR613-201ENST00000385248 95 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 MIR1298-201ENST00000408783 112 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 Y_RNA.590-201ENST00000410140 107 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 RNU6-651P-201ENST00000411040 105 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.78□□□□□ -2.12
NR1D1P20393 RPS26P55-201ENST00000471178 356 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 AC005840.1-201ENST00000498412 377 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 SNORA25.15-201ENST00000516487 89 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 RNA5SP480-201ENST00000516840 109 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 AC011921.3-201ENST00000605540 361 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.78□□□□□ -2.12
NR1D1P20393 AL078604.3-201ENST00000615580 211 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 U6.73-201ENST00000619194 103 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 MIR338-201ENST00000636369 67 ntBASIC1.78□□□□□ -2.12
NR1D1P20393 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.78□□□□□ -2.12
NR1D1P20393 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
NR1D1P20393 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
NR1D1P20393 AC245060.5-201ENST00000610778 3293 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 Y_RNA.292-201ENST00000364904 97 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 MT-TR-201ENST00000387439 65 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 CST2P1-201ENST00000425770 87 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 HMGN2P34-201ENST00000437647 269 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 RPS27P22-201ENST00000478056 241 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 RNU6-1041P-201ENST00000516254 102 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 AC136628.3-201ENST00000521868 290 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 AC024995.1-201ENST00000523014 93 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.77□□□□□ -2.13
NR1D1P20393 MIR4438-201ENST00000585271 93 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.77□□□□□ -2.13
NR1D1P20393 AC084768.2-201ENST00000622736 221 ntBASIC1.77□□□□□ -2.13
NR1D1P20393 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NR1D1P20393 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NR1D1P20393 RNU6-1272P-201ENST00000362776 107 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 Y_RNA.274-201ENST00000364714 101 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 Y_RNA.287-201ENST00000364853 94 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 RNU6-407P-201ENST00000365280 104 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 AL627390.1-201ENST00000396055 340 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 AL117342.1-201ENST00000404861 406 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.76□□□□□ -2.13
NR1D1P20393 RPL31P63-201ENST00000422565 375 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.76□□□□□ -2.13
NR1D1P20393 AL135790.2-201ENST00000437701 267 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 HSPE1P21-201ENST00000438283 308 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.76□□□□□ -2.13
NR1D1P20393 SNORD116-28-201ENST00000516123 91 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 RNU6-1278P-201ENST00000516130 107 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 Y_RNA.679-201ENST00000516416 91 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 AL359075.3-201ENST00000613288 217 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 AC073349.3-201ENST00000617616 186 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 snoU18.1-201ENST00000629629 71 ntBASIC1.76□□□□□ -2.13
NR1D1P20393 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
NR1D1P20393 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
NR1D1P20393 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
NR1D1P20393 RNU6-661P-201ENST00000362409 107 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 Y_RNA.83-201ENST00000363005 113 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 RNU1-22P-201ENST00000363334 158 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 Y_RNA.199-201ENST00000364014 102 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 RNU6-801P-201ENST00000364087 105 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 Y_RNA.297-201ENST00000364950 91 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 Y_RNA.310-201ENST00000365063 113 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 Y_RNA.341-201ENST00000365341 102 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 RNU6-417P-201ENST00000384712 107 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 RNU4-62P-201ENST00000410125 130 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 RNA5SP100-201ENST00000410903 110 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 RNA5SP59-201ENST00000410922 110 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 Y_RNA.626-201ENST00000411288 95 ntBASIC1.75□□□□□ -2.13
NR1D1P20393 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.75□□□□□ -2.13
NR1D1P20393 Y_RNA.637-201ENST00000459424 114 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms