Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC024995.1-201ENST00000523014 93 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 AC068339.1-201ENST00000526965 141 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 Y_RNA.818-201ENST00000618813 71 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
NFKB1P19838 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NFKB1P19838 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NFKB1P19838 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NFKB1P19838 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
NFKB1P19838 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
NFKB1P19838 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
NFKB1P19838 Y_RNA.99-201ENST00000363138 105 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 SNORD68-201ENST00000363214 84 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 RNU6-268P-201ENST00000364174 107 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 MIR488-201ENST00000365739 83 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 RNY1P6-201ENST00000384193 109 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 Y_RNA.547-201ENST00000384654 119 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 SNORA46-201ENST00000384762 135 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 MIR590-201ENST00000385008 97 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 SNORD67-201ENST00000390833 111 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 RNU7-70P-201ENST00000516941 66 ntBASIC3.15□□□□□ -1.91
NFKB1P19838 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.15□□□□□ -1.91
NFKB1P19838 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.15□□□□□ -1.91
NFKB1P19838 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NFKB1P19838 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.15□□□□□ -1.91
NFKB1P19838 Y_RNA.78-201ENST00000362970 110 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 SNORD114-6-201ENST00000364393 72 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 Y_RNA.388-201ENST00000383919 113 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 SNORD15B-201ENST00000384714 146 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 RNU4-47P-201ENST00000410876 114 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.14□□□□□ -1.91
NFKB1P19838 AL445646.1-201ENST00000431784 216 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.14□□□□□ -1.91
NFKB1P19838 SNORA59A-201ENST00000459326 152 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 RN7SL20P-201ENST00000488827 297 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 SNORD36C-201ENST00000516733 66 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 RNU6-158P-201ENST00000517104 100 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 SUMO2P16-201ENST00000519475 264 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.14□□□□□ -1.91
NFKB1P19838 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NFKB1P19838 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NFKB1P19838 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
NFKB1P19838 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NFKB1P19838 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
NFKB1P19838 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.13□□□□□ -1.91
NFKB1P19838 snoU2-30.1-201ENST00000365012 70 ntBASIC3.13□□□□□ -1.91
NFKB1P19838 Y_RNA.440-201ENST00000384120 114 ntBASIC3.13□□□□□ -1.91
NFKB1P19838 AC003685.2-201ENST00000422795 395 ntBASIC3.13□□□□□ -1.91
NFKB1P19838 CST2P1-201ENST00000425770 87 ntBASIC3.13□□□□□ -1.91
NFKB1P19838 RN7SL504P-201ENST00000494496 287 ntBASIC3.13□□□□□ -1.91
NFKB1P19838 AL163195.1-201ENST00000496941 348 ntBASIC3.13□□□□□ -1.91
NFKB1P19838 RNU6-109P-201ENST00000516364 107 ntBASIC3.13□□□□□ -1.91
NFKB1P19838 RNU6-184P-201ENST00000516514 107 ntBASIC3.13□□□□□ -1.91
NFKB1P19838 CTSLP2-204ENST00000629029 392 ntBASIC3.13□□□□□ -1.91
NFKB1P19838 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NFKB1P19838 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NFKB1P19838 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NFKB1P19838 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
NFKB1P19838 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NFKB1P19838 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NFKB1P19838 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
NFKB1P19838 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.12□□□□□ -1.91
NFKB1P19838 RNU1-133P-201ENST00000364867 167 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 Y_RNA.344-201ENST00000365381 112 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 SNORA9-201ENST00000384215 133 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 MIR548D2-201ENST00000384955 97 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 MIR34B-201ENST00000385076 84 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 RNU6-220P-201ENST00000390919 107 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 U8.17-201ENST00000391292 132 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 SNORA19.1-201ENST00000410656 129 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 RNU6-938P-201ENST00000411285 103 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 UQCRHP3-201ENST00000451503 251 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 RNU7-164P-201ENST00000459221 62 ntBASIC3.12□□□□□ -1.91
NFKB1P19838 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.12□□□□□ -1.91
NFKB1P19838 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.11□□□□□ -1.91
NFKB1P19838 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
NFKB1P19838 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NFKB1P19838 AC073325.2-201ENST00000339545 159 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 RNU6-1084P-201ENST00000362498 107 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 Y_RNA.336-201ENST00000365307 109 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 SNORA25B-201ENST00000365507 128 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 RNU6-160P-201ENST00000384591 107 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NFKB1P19838 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 RPS29P12-201ENST00000460178 152 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 RNU7-123P-201ENST00000515911 60 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 AC084364.2-201ENST00000546924 395 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 MIR5004-201ENST00000579078 107 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 MIR4298-201ENST00000584380 73 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
NFKB1P19838 MIR622-201ENST00000638396 96 ntBASIC3.11□□□□□ -1.91
NFKB1P19838 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NFKB1P19838 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
NFKB1P19838 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NFKB1P19838 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NFKB1P19838 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NFKB1P19838 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.1□□□□□ -1.91
NFKB1P19838 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.1□□□□□ -1.91
NFKB1P19838 AC107083.1-201ENST00000439643 279 ntBASIC3.1□□□□□ -1.91
NFKB1P19838 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 300.1 ms