Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 SNORD45.3-201ENST00000363836 72 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SNHG28P0DPA3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SNHG28P0DPA3 RNY4P18-201ENST00000391107 89 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 RNA5SP511-201ENST00000410487 115 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 AC097463.2-201ENST00000421074 142 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 AC010154.1-201ENST00000425857 269 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 AC074290.1-201ENST00000448883 135 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 HMGN2P23-201ENST00000456759 269 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 RNU7-57P-201ENST00000459540 60 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.16□□□□□ -2.06
SNHG28P0DPA3 DEFB122-202ENST00000569013 197 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 AP003357.1-201ENST00000604497 148 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.16□□□□□ -2.06
SNHG28P0DPA3 AP001340.1-201ENST00000624405 217 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.16□□□□□ -2.06
SNHG28P0DPA3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SNHG28P0DPA3 RNU6-235P-201ENST00000362644 107 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 RNU6-199P-201ENST00000362954 107 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.393-201ENST00000383936 102 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.563-201ENST00000384707 108 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 SNORD37.2-201ENST00000391075 66 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 MIR873-201ENST00000401120 77 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 MIR1294-201ENST00000408503 142 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 RNU4-43P-201ENST00000410628 137 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.15□□□□□ -2.07
SNHG28P0DPA3 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.15□□□□□ -2.07
SNHG28P0DPA3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.15□□□□□ -2.07
SNHG28P0DPA3 AC015712.3-201ENST00000559380 164 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 AL021707.8-201ENST00000609428 183 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 MIR6844-201ENST00000637122 62 ntBASIC2.15□□□□□ -2.07
SNHG28P0DPA3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNHG28P0DPA3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SNHG28P0DPA3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SNHG28P0DPA3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SNHG28P0DPA3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RNU6-117P-201ENST00000365415 107 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RNU6-144P-201ENST00000383951 107 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RNU6-484P-201ENST00000384016 107 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RNU6-136P-201ENST00000384663 107 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RNU6-376P-201ENST00000384731 106 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 MIR144-201ENST00000384886 86 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 SNORA40.5-201ENST00000391061 128 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 SNORA40.18-201ENST00000391200 128 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RNA5SP354-201ENST00000391247 136 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 MIR1283-1-201ENST00000408494 87 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.630-201ENST00000411370 108 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 AL158823.1-201ENST00000418441 478 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 AL445685.2-201ENST00000422551 342 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.14□□□□□ -2.07
SNHG28P0DPA3 HSPE1P13-201ENST00000451143 297 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RNU7-14P-201ENST00000459331 62 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RPS26P55-201ENST00000471178 356 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RPS27P26-201ENST00000494583 239 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 RNU2-60P-201ENST00000517290 128 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 AC127455.1-201ENST00000565496 145 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 MIR4255-201ENST00000579351 72 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 MIR5688-201ENST00000580619 83 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 POLR3GP1-201ENST00000594073 261 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 AL356280.1-201ENST00000603614 379 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 AC011603.4-201ENST00000611325 277 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 MIR6129-201ENST00000616087 109 ntBASIC2.14□□□□□ -2.07
SNHG28P0DPA3 CENPCP1-201ENST00000533085 2578 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SNHG28P0DPA3 MIR367-201ENST00000362299 68 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 RNU6-978P-201ENST00000364371 103 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.280-201ENST00000364765 112 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 RNU6-915P-201ENST00000364943 103 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 RNU6-728P-201ENST00000365375 104 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 RNU6-418P-201ENST00000384035 107 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 AC003685.2-201ENST00000422795 395 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.13□□□□□ -2.07
SNHG28P0DPA3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 RNU6-221P-201ENST00000459541 99 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 AC010531.2-201ENST00000465012 153 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 AC090515.1-201ENST00000465295 476 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.13□□□□□ -2.07
SNHG28P0DPA3 AC015720.1-201ENST00000565251 277 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 MIR4524B-201ENST00000581569 115 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 AL929325.1-201ENST00000603096 117 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 uc_338.14-201ENST00000613162 166 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 MIR1248-201ENST00000629190 106 ntBASIC2.13□□□□□ -2.07
SNHG28P0DPA3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNHG28P0DPA3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.13□□□□□ -2.07
SNHG28P0DPA3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SNHG28P0DPA3 MTND5P32-201ENST00000560711 1802 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNHG28P0DPA3 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms