Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 HMGN1P10-201ENST00000474557 553 ntBASIC1.69□□□□□ -2.14
CSPG5O95196 HMGN1P7-201ENST00000491722 313 ntBASIC1.69□□□□□ -2.14
CSPG5O95196 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.69□□□□□ -2.14
CSPG5O95196 AC097462.1-201ENST00000514125 324 ntBASIC1.69□□□□□ -2.14
CSPG5O95196 RNU6-63P-201ENST00000516690 95 ntBASIC1.69□□□□□ -2.14
CSPG5O95196 AL078603.1-201ENST00000603824 313 ntBASIC1.69□□□□□ -2.14
CSPG5O95196 MIR6734-201ENST00000621166 68 ntBASIC1.69□□□□□ -2.14
CSPG5O95196 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.69□□□□□ -2.14
CSPG5O95196 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSPG5O95196 Y_RNA.149-201ENST00000363558 117 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 Y_RNA.172-201ENST00000363765 102 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 RNU6-290P-201ENST00000365212 101 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 Y_RNA.376-201ENST00000365638 108 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 Y_RNA.418-201ENST00000384029 102 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 MIR568-201ENST00000385036 95 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CSPG5O95196 RNU2-61P-201ENST00000411069 191 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 MTND3P2-201ENST00000438452 342 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 SUMO1P2-201ENST00000452524 304 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 RNU7-172P-201ENST00000517125 64 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.68□□□□□ -2.14
CSPG5O95196 AL161670.1-201ENST00000554348 137 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 AC073413.2-201ENST00000604332 360 ntBASIC1.68□□□□□ -2.14
CSPG5O95196 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
CSPG5O95196 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.67□□□□□ -2.14
CSPG5O95196 RNU4-80P-201ENST00000363200 141 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 Y_RNA.796-201ENST00000364268 102 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 Y_RNA.799-201ENST00000364992 102 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.67□□□□□ -2.14
CSPG5O95196 RNU6-136P-201ENST00000384663 107 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 Y_RNA.569-201ENST00000384749 103 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 SNORA70.12-201ENST00000516084 153 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 RNU6-1337P-201ENST00000516525 95 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 SNORA4-201ENST00000584302 138 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 MIR8062-201ENST00000621515 85 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 AC127459.3-201ENST00000624328 466 ntBASIC1.67□□□□□ -2.14
CSPG5O95196 Y_RNA.191-201ENST00000363972 113 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 RNU6-338P-201ENST00000383888 105 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 Y_RNA.396-201ENST00000383949 103 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 Y_RNA.461-201ENST00000384263 103 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 Y_RNA.483-201ENST00000384380 101 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 SNORD116-13-201ENST00000384408 92 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 MT-TW-201ENST00000387382 68 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 RNU6-1203P-201ENST00000410703 110 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 AL354695.1-201ENST00000427935 228 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 AC245047.3-201ENST00000429428 127 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 MTCYBP9-201ENST00000431021 303 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.66□□□□□ -2.14
CSPG5O95196 MTCO2P24-201ENST00000515611 426 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 RNU7-99P-201ENST00000516271 62 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 RNU6-970P-201ENST00000516312 107 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 MIR4421-201ENST00000578133 69 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 MIR3937-201ENST00000580135 106 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 MIR4422-201ENST00000581938 83 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 AL162730.1-201ENST00000605734 292 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.66□□□□□ -2.14
CSPG5O95196 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CSPG5O95196 ZNF209P-201ENST00000593450 2304 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 RNU6-117P-201ENST00000365415 107 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 snosnR66.1-201ENST00000391095 99 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 RNU6-855P-201ENST00000410395 104 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 AC010154.1-201ENST00000425857 269 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 AL135790.2-201ENST00000437701 267 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 AL606517.2-201ENST00000442855 241 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 TRBVB-201ENST00000477100 408 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 RNA5SP102-201ENST00000516865 106 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 SCARNA24.2-201ENST00000516968 130 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 DEFB108E-201ENST00000524692 240 ntBASIC1.65□□□□□ -2.15
CSPG5O95196 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.65□□□□□ -2.15
CSPG5O95196 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.65□□□□□ -2.15
CSPG5O95196 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
CSPG5O95196 SNORD114-7-201ENST00000362520 77 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 RNU6-392P-201ENST00000364926 101 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 RNU6-574P-201ENST00000384265 107 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 RNU6-472P-201ENST00000384299 107 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 RNU6-376P-201ENST00000384731 106 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 MIR1302-6-201ENST00000408466 90 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 MTCO1P5-201ENST00000433573 344 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 AC079140.2-201ENST00000506193 142 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 RNU6-1338P-201ENST00000516328 91 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.64□□□□□ -2.15
CSPG5O95196 AC011604.1-201ENST00000545978 196 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 RPL21P9-201ENST00000556149 474 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 AL929325.1-201ENST00000603096 117 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.64□□□□□ -2.15
CSPG5O95196 MIR6504-201ENST00000613520 61 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 AP001282.2-201ENST00000616149 309 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 AC095038.3-201ENST00000634439 195 ntBASIC1.64□□□□□ -2.15
CSPG5O95196 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CSPG5O95196 RNU4-13P-201ENST00000364019 141 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 Y_RNA.237-201ENST00000364439 102 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 RNA5SP259-201ENST00000365541 109 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 RNU11-5P-201ENST00000391216 129 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 RNA5SP511-201ENST00000410487 115 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 RN7SKP200-201ENST00000410564 320 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 HSPE1P13-201ENST00000451143 297 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 AC091021.1-201ENST00000468051 388 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 254.7 ms